Gene Spro_4218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4218 
Symbol 
ID5603532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4675084 
End bp4677597 
Gene Length2514 bp 
Protein Length837 aa 
Translation table11 
GC content56% 
IMG OID640939778 
Productmolybdopterin guanine dinucleotide-containing S/N-oxide reductase 
Protein accessionYP_001480440 
Protein GI157372451 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02164] trimethylamine-N-oxide reductase TorA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.216901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTC ACGATTTCAA CCCTTCTCGC CGACGGTTTA TAGCCGGCGT ACTGGCCGCG 
GGGACTGCCA GCATGCTGGG CCCCAATCCT CTACTCGGCA AGGTGTGGGC GGCAGGCGAA
AGCCCTGAGC GCTGGATCCA GTCGGGATCG CATTTTGGGG CTTTTGAGGC CAAGGTGGTC
AACGGCGAAT GGATCGACAC CCGCCCGTTC AAACACGATA AATATCCGTG CGATATGCTC
AAGGCGGTGC GCGAAATCGT CTATAACCCG TCGCGAGTAC GGTACCCCAT GGTTCGGCTG
GACTGGTTGC GCAAACGCGA GCTGTCCGAC CGCAGCCAAC GTGGCGATAA CCGTTTTGTG
CGTGTGAGTT GGGATCAGGC GCTGGACCTG GTCTATCAGG AGTTGGAGCG GGTGCAAAAA
AACCATGGCT CATCCGGCGT GTTTACCGGG CTGGCCGATT GGCAGATGGT GGGCAAGTTG
CATAAGGCCG GGGGCGCAAT GGATCGCGGG CTTGGCCTTC ATGGTAGCTA TGTCACCACC
GTAGGTGACT ATTCGGCCGC GGCGGCGCAG GTGATCTTGC CCCACGTAAT AGGATCATTG
GAGGTGTATG AGCAGCAAAC CTCGCTGCCT TTGGTGATTG AAAATACCCA GACCATCGTG
CTGTGGGGCT GCGATCCGAT CAAAAACCTG CAGATCGAAT ACCTGGTTCC CGATCACGAT
CCCTTTGGCT ACTGGCAGCA GATTAAAGAG CGCGTGCAAC AAGGCAAAAT ACGGGTGATT
AGCGTCGATC CGGTGTGCAG TAAAACGCAG AACTATCTCG GTTGCGAACA GTTGGCCTTG
AACCCGCAGA CGGACGTGGC CCTGATGCTG GGGCTGGCGC ATACGCTGTA CCAGGAAAAA
CTCTATGACG CTTCATTTAT CAAAGATTAT TGCGTGGGTT TCGAGCAGTT TCTGCCTTAT
TTGATGGGGG AGACGGATCA ACAACCTAAA GACGCGGAGT GGGCCGCAGG CCTCTGTGGA
CTCACTCCCG AGCAGATCCG CGAATTTGCA CGGCTGCTGG TCAAGGGGCG TACCCAGTTT
ATGGGGGGCT GGTGCGTTCA GCGCATGCAT CACGGGGAAC AATACCCGTG GATGTTGGTG
ATACTGGCCA GCATGGTGGG GCAGATAGGC CTTCCTGGCG GCGGTGTCGG TTTTGGCTGG
CATTACAACG GTGGTGGCAC TGTGACCTCA TTGGGCCCGG TACTTTCCGG ATTAGGTAGT
CTGTCCAACC CTCCTGCACC CATCCATGCC GCCGATTTCC GCGGCGCTTC CGAGCATATC
CCCGTGGCAC GTTTCATCGA TTGCCTGCTC TCGCCCGGCA AGACCCTGGC GTTTAATGGT
GAGACGCTCA CCTATCCTGA TATCAGGTTG GCGCTCTTTA GTGCTGCCAA TCCGTTCCAT
GCCCAACAGG ATCGCAACCG AATGATCGAA GCCTGGAAGC GGCTGGAAAC GGTGGTGGTG
TTGGATCACC AATGGACGGC GTCCTGCCGT TTTGCCGATA TTGTGCTGCC GGTGACCACG
CGTTTTGAGC GTAACGATAT CGAACAGTTC GGTACGCATT CCAACAAAGG GTTGATGGCG
ATTCGCCAGG TGGTGAAGCC GCAGTATGAG GCTCGCCACG ACTTTGACGT GTTTAGCGAA
CTCTGCAAGC GTTTTGGCCG CGATCAGGTT TACACCGAAA GGCGCAACGA GATGCAGTGG
ATCAAGGCTA TCTATGAAGA AGGGGTGAAG CAGGGGGCCG CGATGGGAGT GAAGATGCCC
AGTTTTTCCA CCTTCTGGGA TGGGGAAGGT TATATCGAAT ATCCGGCAGG CCAACCTTGG
GTGCGTCACG GTGATTTTCG CGAACAACCC GACCTCTATC CTTTGGGGAC GCCATCCGGC
CTGATTGAAA TCTACAGTAA GACCATTGCC GCTTTTAACT ACCGGGAATG CCCTGGCCAT
CCGCTGTGGA TGGAGCCTTT TGAACGCAGC CACGGAGGCA AAGGTTCAGA GAAATATCCG
CTGCACCTGC AATCCTGCCA CCCGGACAAG CGGCTGCATT CGCAACTGTG TTCCAGCGAT
AACTACCGCG CGACCTATGC TGTAGCGGGG CGTGAACCCT TATATATAGG CCCAGAGGAT
GCTAAAGCTC GCGGTTTGAA AGCCGGTGAC GTAGTACGCG TTTTTAATGC GCGCGGGCAA
GTGCTTGCCG GGGTAGTCAT TAGTCCAGAC TACTCACCTG GCGTTGTGCG TATCCATGAG
GGGGCATGGT ATTCCCCTCT GGTGGGGGGG AAAGCCGGAA CGCTTTGCAC CTATGGCGAT
CCTAACGTCT TAAGTGCCGA TATTGGAACG TCTCAATTGG CACAAGGGAC TTCGGCTCAT
TCTGCGTTGG TTCAGGTGGA GCTTTATCAG GGCGAGCTTC CGCCGGTAAC GGGTTTCGGT
GGGCCACAGG AAATTAAACC GGACACCAAA GAGGCCTCTC ATGCCATTAC TTAA
 
Protein sequence
MDIHDFNPSR RRFIAGVLAA GTASMLGPNP LLGKVWAAGE SPERWIQSGS HFGAFEAKVV 
NGEWIDTRPF KHDKYPCDML KAVREIVYNP SRVRYPMVRL DWLRKRELSD RSQRGDNRFV
RVSWDQALDL VYQELERVQK NHGSSGVFTG LADWQMVGKL HKAGGAMDRG LGLHGSYVTT
VGDYSAAAAQ VILPHVIGSL EVYEQQTSLP LVIENTQTIV LWGCDPIKNL QIEYLVPDHD
PFGYWQQIKE RVQQGKIRVI SVDPVCSKTQ NYLGCEQLAL NPQTDVALML GLAHTLYQEK
LYDASFIKDY CVGFEQFLPY LMGETDQQPK DAEWAAGLCG LTPEQIREFA RLLVKGRTQF
MGGWCVQRMH HGEQYPWMLV ILASMVGQIG LPGGGVGFGW HYNGGGTVTS LGPVLSGLGS
LSNPPAPIHA ADFRGASEHI PVARFIDCLL SPGKTLAFNG ETLTYPDIRL ALFSAANPFH
AQQDRNRMIE AWKRLETVVV LDHQWTASCR FADIVLPVTT RFERNDIEQF GTHSNKGLMA
IRQVVKPQYE ARHDFDVFSE LCKRFGRDQV YTERRNEMQW IKAIYEEGVK QGAAMGVKMP
SFSTFWDGEG YIEYPAGQPW VRHGDFREQP DLYPLGTPSG LIEIYSKTIA AFNYRECPGH
PLWMEPFERS HGGKGSEKYP LHLQSCHPDK RLHSQLCSSD NYRATYAVAG REPLYIGPED
AKARGLKAGD VVRVFNARGQ VLAGVVISPD YSPGVVRIHE GAWYSPLVGG KAGTLCTYGD
PNVLSADIGT SQLAQGTSAH SALVQVELYQ GELPPVTGFG GPQEIKPDTK EASHAIT