| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4205 |
|---|
| Symbol | |
|---|
| ID | 5604704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4662717 |
|---|
| End bp | 4664087 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640939765 |
|---|
| Product | PTS system, sucrose-specific IIBC subunit |
|---|
| Protein accession | YP_001480427 |
|---|
| Protein GI | 157372438 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
|---|
| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR01996] PTS system, sucrose-specific IIBC component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATTA CCGCAACCGC TAACGCGCTA TTGCCGTTGC TCGGCGGCAA AGAAAACATA
GCCAGTGCCG CCCACTGCGC CACACGCTTG CGCCTGGTGC TGCTCGATGA CAGCAAGGTG
GACAAAGTGG CGATCGGCAA GCTGGAAGGG GTGAAAGGCT GCTTTAGCAA CGCCGGGCAA
ATCCAGGTGA TTTTCGGTAC CGGGCTGGTC AACAAGGTGC ACGCGGAGTT TATCAAGGCG
GCCGGCGTCA GCGAGTCCAG CAAGTCTGAG GCCGCCGATA TCGCGGCGAA AAAACTCAAC
CCGCTGCAGC GCATTGCCCG CCTGCTGTCG AATATCTTTG TGCCAATCAT CCCGGCTATC
GTCGCCTCCG GCCTGCTGAT GGGCCTGCTC GGCATGGTGA AAACCTACGG CTGGGCCGAT
GCCAACAGCG CCGTATTCGT GATGCTGGAT ATGTTCAGTT CAGCGGCATT TATTATTTTA
CCAATCCTGA TCGGCTTCAC CGCCGCGCGT GAATTTGGTG GTAACCCCTA TCTGGGCGCT
ACGCTCGGCG GCATTCTGAC CCATCCGGCT CTGACCAACG CCTGGGGCGT CGCCAGCGGT
TTTCACACCA TGGATTTCTT CGGGTTGCAG ATTGCCATGA TCGGCTATCA GGGCACGGTG
TTCCCGGTGC TGTTGACGGT GTGGTTTATG AGCATGCTGG AAAAACAGCT GCGCAGAGTG
ATCCCCAATT CGCTGGATCT GATCCTGACG CCGTTCCTGA CGGTGGTGAT CTCCGGCTTC
GTCGCCATGT TGTTTATCGG CCCGGCCGGT CGCGCGCTGG GTGATGGCAT CTCGCTGGTG
CTCAGCACGC TGATCGCCCA CGCCGGTTGG TTTGCCGGCT TGCTGTTCGG TGGCCTGTAT
TCCGCCATCG TCATCACCGG TATCCACCAC AGTTTCCATG CCGTCGAAGC CGGACTGCTC
GGCAATCCAA ATATCGGCGT TAACTTCCTG CTGCCGATCT GGTCGATGGC CAATATCGCT
CAGGGCGGTG CCTGTCTGGC GGTCTATTTC AAAACCCGCG ACGCCAAGAT CAAAGCCATC
GCGGTGCCTT CGGCCTTTTC CGCCATGCTT GGCATTACCG AAGCGGCGCT GTTCGGCATT
AACCTGCGCT TTGTGAAACC CTTCCTGGCG GCGCTGGCCG GCGGTGCGCT CGGCGGTGCC
TGGGTGGTGG CCAATCACGT CGGCATGAAC GCGGTCGGGC TGACGGCAAT TCCGGGCATG
GCCATTGTGC AGGCCAGTTC GCTGGTCAGC TATATCATTG GTTTGGTGAT CGCCTTCGGC
AGCGCCTTTA TTATCTCGTT GCTGCTGAAA TACAAAACGG ACAGCGAATA A
|
|---|
| Protein sequence | MDITATANAL LPLLGGKENI ASAAHCATRL RLVLLDDSKV DKVAIGKLEG VKGCFSNAGQ
IQVIFGTGLV NKVHAEFIKA AGVSESSKSE AADIAAKKLN PLQRIARLLS NIFVPIIPAI
VASGLLMGLL GMVKTYGWAD ANSAVFVMLD MFSSAAFIIL PILIGFTAAR EFGGNPYLGA
TLGGILTHPA LTNAWGVASG FHTMDFFGLQ IAMIGYQGTV FPVLLTVWFM SMLEKQLRRV
IPNSLDLILT PFLTVVISGF VAMLFIGPAG RALGDGISLV LSTLIAHAGW FAGLLFGGLY
SAIVITGIHH SFHAVEAGLL GNPNIGVNFL LPIWSMANIA QGGACLAVYF KTRDAKIKAI
AVPSAFSAML GITEAALFGI NLRFVKPFLA ALAGGALGGA WVVANHVGMN AVGLTAIPGM
AIVQASSLVS YIIGLVIAFG SAFIISLLLK YKTDSE
|
|---|
| |