Gene Spro_4198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4198 
Symbol 
ID5604655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4652173 
End bp4654320 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content60% 
IMG OID640939758 
Productphospholipase C 
Protein accessionYP_001480420 
Protein GI157372431 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3511] Phospholipase C 
TIGRFAM ID[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATT TTTCGCGCAG AGAAATACTG CGGGCTGCCG CCATCGGATC GGCTTTTTCA 
CTGTTACCCG CCTCGATCCG CAAAGCGCTG GCAATCCCCG CCAATAATCG TACCGGCACC
CTTAACGATG TCGAACACGT GGTGATCCTG ATGCAGGAAA ACCGTTCTTT CGACCATTAC
TTCGGCACCT TGCCCGGCGT ACGCGGCTTT AGCGATCGCA TCACCATTCC TTTGCCCGGT
GGCCGTCACG TCTGGCAACA GCAGGGGGAA CATCGGCTGG TGCTGCCCTA TCATCTCGAC
AGCAAGCTCG GCAATGCCCA ACGGGTAAGC GGCACGCCGC ATTCGTGGGT AGATGAACAA
TCCGCCTGGG ATAACGGCCG CATGAGCGCC TGGCCGACCT ACAAAACGCC CACCTCGATG
GGCTATTACC GTCGGCACGA ATTGCCGTTC CAGTTTGCGC TGGCCGAAAC CTTCACCCTG
TGCGACGCCT ATCATTGCTC GATCCACGCC GGGACCAACA CCAACCGCCT GTTCCACTGG
ACCGGCACCA ATGGCCCGAC GGCGGCCGAG GTCGCGGTGG TGGTCAACGA GTGGGACAGC
CCCGGCCCGG CGGAAGTCGG CTACCAGTGG CAGACCTATC CGGAGCGGCT GGAGGCCGGC
GGCGTCAGTT GGAAGGTCTA TCAGTTTTTG CCTGATAACT TCACCGACAA CCCACTGGCG
GGATTCCGCC AGTACCGTGC CGCCAGCGTT AAGGTCGGCA ACCCGGCACA GCCGCCAAAA
GACTTCACCG CCTTTGTACC CTATAGCGAT GAATTGAACG TTGAAGCCCC GCTGTACAAG
GGCAATGGCA ATACGCTGCC GGCAGCCGAC GGCAACGATC TGGATGCGAT GCTGACCGGC
TTTCGTAACG ACGTACAGCA GGGCAAGCTG CCGCAGGTAA GCTGGATTAT CGCCCCGGCG
GCCTACTCGG AGCACCCCGG GCCTTCCAGC CCGGTGCAGG GCGGCTGGTT TACCCAGGAG
ATCCTCAATG CGCTGACGGA TAACCCGGAG GTGTGGAGCA AGACCGTGCT GCTGGTCAAT
TACGACGAAA ACGACGGTTT CTTCGACCAT ATGCCTTCGC CCTCGGCCCC GTCACTGCGT
GAAGACGGCA GCTTCGCCGG TAAATCGACG GTGCCGTTCG ATAGTGAAAT CTTTCAGCAT
GTCGCCCCAC CCGGTTCACA AGAGCAACCG CCACCGGACG GCCGTATCTA TGGCCCAGGG
CCGCGAGTAC CGATGTTGGT GCTGTCTCCC TGGAGCCGTG GCGGCTGGGT CAATTCACAG
GTATTCGACC ACACCTCGGT ACTGCAATTT TTAGAAAAAC GTTTCCAGGT GCATGAACCG
AACATCAGCG CCTGGCGACG GGCGGTCTGT GGTGACCTCA CTTCCGCCTT CAACTTTGTC
GACCCTAATG AGGAAACCTT GCCTCGTCTG CCCACCACCA GTCGCCACGC CGCCGACAGT
CTGCGCCAGC GACAGGAACA GTTACCGCAG GTGCCCTTGC CGCCGGTGAA CAGGCAACAG
TTACCGCATC AGTCGCGACT GGCACGCCCA TCGCGTGCGC TGCCTTACCA GCTGCACGTT
GAGGCCAGCA GCAACCCCGA GCAAAAAATG CTGACGCTCA ACCTGTACAA CACTGGCGAA
CAGGGCGTGG TCTTTCATGT GTATGACCTG CTGAGTCTGG AGCAGATCCC ACGGCGCTAT
ACCGTCGAGG CCGGTAAAGC GGTCAGTGAC AACTGGCTAA CGGCGGATCG CTACCACCTG
TGGTTGCTAG GCCCCAACGG TTTTCATCGT GAGCTGGGTG GCAGCGTTCT GCAGCCGCAG
CCGGAAGTGC AACTCACCCC GCAGGGCGAT CGTTTATCGC TAACGCTAAC CAACGCGGGT
AGCCAGGCAA CAACGGTAAC CATCGCCCGC TGCCCTTATA CGCAAAAAGG CCCCTGGCAG
ATTGAACTGC CGGCGGGTGG CCGCCATCAG CAGGCCTTTG CTACCAAATC CAGCGGTGGC
TGGTACGATC TTTCACTGCA GGGGGCACAG GGCTGGCAAC GCCGACTGGC AGGCCGGCTG
GAGAACGGCG ACCACAGCGT CAGCGATCCG TTAATGGGTA AAGCCTGA
 
Protein sequence
MPDFSRREIL RAAAIGSAFS LLPASIRKAL AIPANNRTGT LNDVEHVVIL MQENRSFDHY 
FGTLPGVRGF SDRITIPLPG GRHVWQQQGE HRLVLPYHLD SKLGNAQRVS GTPHSWVDEQ
SAWDNGRMSA WPTYKTPTSM GYYRRHELPF QFALAETFTL CDAYHCSIHA GTNTNRLFHW
TGTNGPTAAE VAVVVNEWDS PGPAEVGYQW QTYPERLEAG GVSWKVYQFL PDNFTDNPLA
GFRQYRAASV KVGNPAQPPK DFTAFVPYSD ELNVEAPLYK GNGNTLPAAD GNDLDAMLTG
FRNDVQQGKL PQVSWIIAPA AYSEHPGPSS PVQGGWFTQE ILNALTDNPE VWSKTVLLVN
YDENDGFFDH MPSPSAPSLR EDGSFAGKST VPFDSEIFQH VAPPGSQEQP PPDGRIYGPG
PRVPMLVLSP WSRGGWVNSQ VFDHTSVLQF LEKRFQVHEP NISAWRRAVC GDLTSAFNFV
DPNEETLPRL PTTSRHAADS LRQRQEQLPQ VPLPPVNRQQ LPHQSRLARP SRALPYQLHV
EASSNPEQKM LTLNLYNTGE QGVVFHVYDL LSLEQIPRRY TVEAGKAVSD NWLTADRYHL
WLLGPNGFHR ELGGSVLQPQ PEVQLTPQGD RLSLTLTNAG SQATTVTIAR CPYTQKGPWQ
IELPAGGRHQ QAFATKSSGG WYDLSLQGAQ GWQRRLAGRL ENGDHSVSDP LMGKA