Gene Spro_4148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4148 
Symbol 
ID5603707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4601864 
End bp4602403 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content52% 
IMG OID640939708 
Productfimbrial protein 
Protein accessionYP_001480370 
Protein GI157372381 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGA ACAAAATTAT GATGGCGGCA GTAGTAGCTT TCGGTATGTC TTCTATGGCT 
CATGCAGACG AAGGCCACGG TAAAGTGAAT TTCGCAGGTT CTATCGTTGA TGCTCCGTGC
TCTATCTCCC CAGAGACTGT TGATCAGACC GTAAACCTGG GCCAGGTGTC CAACGTGGCT
CTGAAAGACG GTGGTAAATC CACGCCGAAA AACTTCCAGA TCGATCTGGA AAACTGCACC
GTTGCTACCG GTAAAACCGT CCAGGTAACT TTCACCGGTG CTAAGGCACA GGAAACCAAT
AAAAACCTGT TGGCCATTAC CGGTTCCGCC AGTGGCGCAG GTATTGCCAT GACTGACACC
AGCGGTGCTC TGGTTGAGCT GGGTAAAGGC GGTACTGCGC AGATGCTGCA GAACGGCAAT
AACACTCTGC AGTTCGCTGC CTACATGCAA GGTCTGACTG CTGGCGAAGG CGGTAGTGCC
GTTGCCGTGG TCCCAGGTGA CTTCACCGCA GTGACTGACT TTACCCTGAC TTACCCGTAA
 
Protein sequence
MKLNKIMMAA VVAFGMSSMA HADEGHGKVN FAGSIVDAPC SISPETVDQT VNLGQVSNVA 
LKDGGKSTPK NFQIDLENCT VATGKTVQVT FTGAKAQETN KNLLAITGSA SGAGIAMTDT
SGALVELGKG GTAQMLQNGN NTLQFAAYMQ GLTAGEGGSA VAVVPGDFTA VTDFTLTYP