Gene Spro_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4143 
Symbol 
ID5603746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4596681 
End bp4597157 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content50% 
IMG OID640939703 
Productfimbrial protein 
Protein accessionYP_001480365 
Protein GI157372376 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.281941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGCTGC TGCCCTTGCT AACGGGAAGC CCCGCCGGGC GTGCGGCTAC GACGCTGCCG 
GATATTAACG TACTGATTAG CGGCACCATT GTGGCTTCCG CGTCATGCCA GATAAACAAC
GGCAACGTTT TAGAAGTGAA CTTTGGCGAA GTAGTTAATT CGCAGATCAA CGGTGTGAAT
TACAAAAAGG TATTCGATTT AAATCTGAAT TGCCGCGGCG GGAAATCAAA TACAGTGCGG
TTGAGATTTA ACGGAACGGC GCATCCGCAA CTGCCAAATG CCTTGGAGGT CGGCGGTAAT
GGTGGCCTGG GGATACAAAT GATGAAGGAT GGTGTGGCGT TTCAACCCTA CAGCTGGATC
CAATTTGAAT ACCCGAACTT GCCGATATTT TCAGCGGTGC CGGTGAAAGC ACCGGGAAGC
AAGATTATAG GTGGGTACTT TGGCACTACG GCCATTATCG AGATTGATTA CCAATAA
 
Protein sequence
MLLLPLLTGS PAGRAATTLP DINVLISGTI VASASCQINN GNVLEVNFGE VVNSQINGVN 
YKKVFDLNLN CRGGKSNTVR LRFNGTAHPQ LPNALEVGGN GGLGIQMMKD GVAFQPYSWI
QFEYPNLPIF SAVPVKAPGS KIIGGYFGTT AIIEIDYQ