Gene Spro_4099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4099 
Symbol 
ID5602747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4555869 
End bp4556561 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content65% 
IMG OID640939660 
Productlytic transglycosylase catalytic 
Protein accessionYP_001480322 
Protein GI157372333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACTC GCCGCATTCT GACCCGGGGG CTATTGCCCC TGTTCGCCCT CCTGAGTTGC 
GGGGGGGCGG CAACCGTTCA TGCGTCCACC CAGCAGGTCC CTTCCGGCTA CCGGGAGGTG
GCGCTGCGCC ACGGGGTGCC GCCGGAGTCC CTGTACTCGG TGGCGCTGGC CGAGACCTCG
ATGGCGCCGA AAAGCATTGT TTCGGTGACC CGCGGGGCCG GTCCGGCCCC GGATGTGGAG
CGCCCCTGGC CCTGGACAAT AAACGTGGCA GGCAAAGGGT ACCGCTACGC CAGCCGTCTG
CAGGCCTGGG AAGCCCTGCA GCGCTTTTTG AAAACACATC CTCGCAAACG TATTGATGTC
GGGATTGCCC AGGTCAATCT GGGCTGGAAC GGCCATCACT TCACGTCGAC CTGGGAGGCG
TTTGATCCGT ACACCAACCT CAACGCGGCG GCGACCATCC TGCGGGAATG TTATGACCGC
AACCCCGGGA GTTGGCTGGT TGCTGCCGGG TGTTACCACC ACCCTGCCGG CGGTGCCCCG
GCAGCCCGGT ATAAATCCAT TGTGAGCGGC AAGCTGGCAC GCCTGAACGG CAGGGCATCT
GCCCCGACCC GGGTGGCCAG TTCAACCCCC ACGCCCACGG CATTACCGGC ACAAACGGCA
GCGCTGACCT GGATTGAACC ACGGAGCCAA TAA
 
Protein sequence
MDTRRILTRG LLPLFALLSC GGAATVHAST QQVPSGYREV ALRHGVPPES LYSVALAETS 
MAPKSIVSVT RGAGPAPDVE RPWPWTINVA GKGYRYASRL QAWEALQRFL KTHPRKRIDV
GIAQVNLGWN GHHFTSTWEA FDPYTNLNAA ATILRECYDR NPGSWLVAAG CYHHPAGGAP
AARYKSIVSG KLARLNGRAS APTRVASSTP TPTALPAQTA ALTWIEPRSQ