| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4096 |
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| Symbol | |
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| ID | 5605055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 4552098 |
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| End bp | 4554290 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640939657 |
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| Product | putative plasmid transfer protein |
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| Protein accession | YP_001480319 |
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| Protein GI | 157372330 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTAT CAATGCGCGA GGGGAGCGCA GCATGCACTT CCAATATGAC AAGCCTGCGA
ATGATAAGGA AGGTCGCAAT GAGTAACCGG CATGTAATGG AAGCCTTGTT GCGCCCGGCC
GTGGAACTCA ACACGGCGAT TGTGGCCGGA GGCGCGGCTG TGGTTTGTGC GATAGCGCCC
TGGTCGGTAG CGCTGGCGCC AGAGGTGAGC TATGTCACCG CCGGCAGCTT TGCAGTGTTG
TCTGCCGTAC GTGCGCGCCA GGGGATGCGA GTGATCCGCT ACCGCGGTAA CCTGCGCCGG
TTACCGCGGT ATGTCATGGA AAGCCGACAG ATCCCGGTGA GCCGGCAGCG ACTGTTCCTG
GGGCGGGGTT TTCGCTGGCA GCAGAAGCAC ACCCAGCGCC TGATGGACAC CCGTCGTCCA
GAGGTTGAGA AGTATGTTCA GCCGCCAAAA ATGTACCAGA TGGCGCGGCA CCTGGAGCTA
AAAACCGAAT ATACCCTGCC ATGGTTGTCC CAACTGCTGC GTAAGGACTC CCCGCTCAAT
CCGGTCAGGC CGCTGCCACC GGTCGGGGGG AACCCGGCGA TCCACGGTAT TGAACCCGAT
GAGCTCGATG TCTCGATGGC GCTTGGCGAA CGCGTAGGGC ATAGCCTGGT GCTGGGGACC
ACCCGTGTGG GCAAAACGCG TCTCGCCGAG TTACTGATCA CCCAGGATAT TCGCCGCGGT
GATATCACCA TCGTGTTTGA TCCAAAAGGT GATGCAGACT TGCTGCGGCG GGTCTGGGCT
GAAGCTCACC GTGCTGGCCG CGGGGATGAG CTGTTCATCT TCCACCTAGG CTGGCCAGAT
ATCTCGGCAC GCTATAACGC CGTGGGGCGT TTTGAGCGGG TGTCAGAGGT GGCTGGTCGT
ATCTCTGGTC AGTTAAGCGG GGAGGGCAAC AGTGCGGCGT TCCGTGAGTT TGCCTGGCGA
TTCGTCAACA TCGTCGCGCG TGCCCTGGTT GCGTTGGGGC AGCGCCCGGA CTACACCCTG
ATCACCCGAT ATGTGAACAA CATCAGTGAA CTGTATGAGA CCTATGCGAA GAAGGTGATT
GAAACGCGTA TGCCGGCACT GCAGCAGCAA ATCGACAATA ACCTGCAGGT GCTGACGGAA
GAGGATGTGC CGCGCAATAT GCAGGGACAA CCGAACGCGG TCAAAATATT TGCAGTCGAA
ATGGCCCTGA GCTCGGAGGC CGGCAAGCAG CTGTACGACC CTATTCTGGA TGGCCTGCGC
TCGGCCGTGC GTTATGACCG TACCTACTTC GATAAAATCG TCGCCTCCCT GTTGCCGCTA
CTGGAGAAAC TCACCACTGG CAAGACTGCG GAGCTGTTGG CGCCGAACTA CATGGATATG
AGCGATCCAA GGCCCATTTT TGACTGGGAG CAGGTCATCC GCAAGCGCGG TATTGTCTAC
GTGGGGTTGG ATGCCTTGTC GGACGGGGTG GTCGCCTCTG CCGTCGGCAA CAGCATGTTT
GCCGACCTGG TATCGGTGGC CGGCCATATC TATAAACACG GCATGCACGG CGGGTTGCCG
ACCCGGGCAG ACGGTAAACT GCCTATCAAC CTGCACTGTG ACGAGTTCAA TGAGTTGATG
GGGGACGAAT TTATCCCTCT TATCAACAAA GGCGGTGGCG CCGGTATGCA AGTGACGGCC
TACACGCAAA CCGAGTCGGA TATCGAGGCG CGCATCGGCA GTACCGCCAA GGCGGCTCAG
GTCACGGGGA ACTTCAATAC CCTGATCATG CTCCGCGTGC GTGAGAACCG GACCGCGCAG
TTACTCACCA CACAGTTGCC GGAAGTGGAT ATCTACACCA AAACCTTGGT ATCAGGGCAT
GCCGATACGG CCGATGTGGA GAAGGGACAG GATTTTACTT CCAATACCCA AGACCGCGTC
GGTACCGTAA AAGCCCCACT GCTTGCCCCG GCGGATGTGA TTAACCTGCC GAAAGGACAG
GCGTTCGCGC TACTGGAAGG CGGTCAACTG TGGAAAATTC GGATGCCACT GCCCAGTGGT
GACAGGGATG ATGCGCTTAT GCCGGCCAAC CTGCAGAAGA TTGCCGAGGA GATGCAGCGC
AACTACCGTA CCAGCGAGTC CTGGTGGTCA GCCAGCACGG TAATGCCGGA TGTTGCCATC
CAAGGGGGGC TGAATGTCGC AAGCGGTGAA TAA
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| Protein sequence | MEVSMREGSA ACTSNMTSLR MIRKVAMSNR HVMEALLRPA VELNTAIVAG GAAVVCAIAP
WSVALAPEVS YVTAGSFAVL SAVRARQGMR VIRYRGNLRR LPRYVMESRQ IPVSRQRLFL
GRGFRWQQKH TQRLMDTRRP EVEKYVQPPK MYQMARHLEL KTEYTLPWLS QLLRKDSPLN
PVRPLPPVGG NPAIHGIEPD ELDVSMALGE RVGHSLVLGT TRVGKTRLAE LLITQDIRRG
DITIVFDPKG DADLLRRVWA EAHRAGRGDE LFIFHLGWPD ISARYNAVGR FERVSEVAGR
ISGQLSGEGN SAAFREFAWR FVNIVARALV ALGQRPDYTL ITRYVNNISE LYETYAKKVI
ETRMPALQQQ IDNNLQVLTE EDVPRNMQGQ PNAVKIFAVE MALSSEAGKQ LYDPILDGLR
SAVRYDRTYF DKIVASLLPL LEKLTTGKTA ELLAPNYMDM SDPRPIFDWE QVIRKRGIVY
VGLDALSDGV VASAVGNSMF ADLVSVAGHI YKHGMHGGLP TRADGKLPIN LHCDEFNELM
GDEFIPLINK GGGAGMQVTA YTQTESDIEA RIGSTAKAAQ VTGNFNTLIM LRVRENRTAQ
LLTTQLPEVD IYTKTLVSGH ADTADVEKGQ DFTSNTQDRV GTVKAPLLAP ADVINLPKGQ
AFALLEGGQL WKIRMPLPSG DRDDALMPAN LQKIAEEMQR NYRTSESWWS ASTVMPDVAI
QGGLNVASGE
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