| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4078 |
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| Symbol | |
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| ID | 5607035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 4532462 |
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| End bp | 4534207 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640939639 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001480301 |
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| Protein GI | 157372312 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGGA TTTTCATGAA AAGGACCTTT CTTTCGCACG GATCCACATC GAAGGCGTTG
AGCCACGTTC TCGCTGGTGT TCTCTTCACC GGCACTTTCC CGGGTATGGC CGCCACGCCC
TCCGATGCCT CGGATCAGGC CGCTTCCGCC ATTGATGCCC GCGAGCAGCA ACGCCAGCAG
GAGCGCGAGC GCGCTCTGCA ACAACAAAAT GCACCGCAGG CCGATGCGCG CTTTTCCCGC
CCCCAGGTTG TGCTGCCGGA TTACCCGGCC AATGAGTCCC CTTGCTTCGC CATCGAACGG
CTCACCTTGG TCGGCGAAAC GGCCGATCGC TTTCAGTGGG CGCTGGAGGC TGCGGCGGAT
GCGAGAGGTC GCTGCCTGGG CGGTCAGGGT ATCGTGCTTG CCATCAATAA AGTGCAAAAC
GCCATACTGG CCAAAGGCTA TGTCACCACC CGGGTGATGG CGCAGGAGCA GGACCTGACC
ACGGGGGCGT TGACGCTGAC CTTGCAACCG GGTCGTATTG GCGACATTCG CTTTGAGGAG
CCAGTCTCCT GGCGTGGACG GCTGTGGAAC GCTATCCCGA TCTCACACGG CGATATCCTC
AACTTGCGTG ATATCGAACA GGGACTGGAG AACTTCAGGC GAATACCCAG CGCCAGTGCC
GACATCAAAA TTGTACCCGG TGCTCAGGAG GCCACCAGTG ACCTGAAGGT CAACTGGCAC
GAAGGTCGGC CGGTACGGCT TAGTCTGGGA CTGGATGACA GCGGCTCCAA GAGTACCGGG
CGTTATCTCG GTTCGGCCAC CCTGGCACTC GATGCCCCCT TTGCGCAGAA TGACCTGTTC
TACGCCAATA TCGGCAAGGA TGTGTTCCAG CACGGACCGT TCGGCAACCG TTCGCATGCA
CTGAACTACT TTTTCCCGGT GGGTTACTGG GCCTTTTCGG CCAACTACAA CGACTACACC
TACCATCAGA ACATCCCCAA CGCCAATGAG GTACTGCGCT ACAGCGGCAA GAGCGACAAC
ATTCAGTTGA CCGTTTCCCG GTTGCTGTAC CGCGACCAAT CCCACAAGAC CACGCTCAAC
CTGCGCGGCT ACCGCAAGCA CTCGACTAAC CACGTGGATG ACGTCGAGCT GACCCAGCAA
AAACGCCGCA CCGCAGGCTG GGAGCTGGGG CTGAACCAGC GCAGCTATTT CGGTACCACC
ACGTTGGATG CCAATATCAG TTGGCGGCGC GGAACCGGGG CGCTGGGTGC CCTGCGCGCA
CCGGAGGAGG TCAACCACGA CGGGTCTGCC CGTACAGGTA TGTTGCTGGG TGATGCAGCC
ATCAATATCC CCTTTGCTCT GGGTGAGCAG CCCTGGCGGG TGTATACCAG CATGCGGGGC
CAGTGGAGCC CTAACGCACT AACGCCGCAG GAGCGAATGG CCATTGCCGG GCGTTACACG
GTGCGCGGCT TTGACGGCGA ACAGATGCTG TCAGGCGAAA AAGGCCTGCT ATGGCGTAAT
GAAATCGCCT GGAATGTGCT TTCTCGTGGG CACGAATTGT ACCTGGCCGC CGACTACGGT
CGGGTGGATG GCCCAGGCAC CCGCTACCTG GTGGGTCATC AGTTGGCGGG CAGTGCGCTC
GGTGTGCGCG GCGCACTGTG GGGGCGATTC AGTTACGACC TATTCGCTGG CGTTCCGCTC
TATAAGCCGG CGGGGTTCCA TACCTCCGGT GCGACCACGG GTTTTAGCGT AAATCTGGAA
ATTTGA
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| Protein sequence | MKWIFMKRTF LSHGSTSKAL SHVLAGVLFT GTFPGMAATP SDASDQAASA IDAREQQRQQ
ERERALQQQN APQADARFSR PQVVLPDYPA NESPCFAIER LTLVGETADR FQWALEAAAD
ARGRCLGGQG IVLAINKVQN AILAKGYVTT RVMAQEQDLT TGALTLTLQP GRIGDIRFEE
PVSWRGRLWN AIPISHGDIL NLRDIEQGLE NFRRIPSASA DIKIVPGAQE ATSDLKVNWH
EGRPVRLSLG LDDSGSKSTG RYLGSATLAL DAPFAQNDLF YANIGKDVFQ HGPFGNRSHA
LNYFFPVGYW AFSANYNDYT YHQNIPNANE VLRYSGKSDN IQLTVSRLLY RDQSHKTTLN
LRGYRKHSTN HVDDVELTQQ KRRTAGWELG LNQRSYFGTT TLDANISWRR GTGALGALRA
PEEVNHDGSA RTGMLLGDAA INIPFALGEQ PWRVYTSMRG QWSPNALTPQ ERMAIAGRYT
VRGFDGEQML SGEKGLLWRN EIAWNVLSRG HELYLAADYG RVDGPGTRYL VGHQLAGSAL
GVRGALWGRF SYDLFAGVPL YKPAGFHTSG ATTGFSVNLE I
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