Gene Spro_4027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4027 
Symbol 
ID5605379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4469726 
End bp4470289 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content57% 
IMG OID640939587 
Producthypothetical protein 
Protein accessionYP_001480250 
Protein GI157372261 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0375113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00119286 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTTAC AGCACCATTT TCTTATCGCT ATGCCATCAC TTCAGGATCC TCGCTTCAAA 
CGCTCGGTGA TTTACGTCTG CGAGCACAAT GAAGACGGCG CCATGGGCCT GGTGATCAAT
AAACCGGTGG AGCAGTTCAC GGTGGAAACG GTGCTGAGCA AACTGAAGAT CATGCCACAG
GCACGTGATC CGGCGATCAG CCTCGATAAA CCGGTGTTTG CCGGTGGCCC GTTAGCAGAC
GATCGCGGTT TTATCCTGCA TACGCCGCGC AAGGGTTTCG GCTCCAGCAT TCAGATCTCG
CCGGATACCA TGATAACCAC CTCGAAAGAC GTGCTGGAAA CGCTGGGCAC CCCGGAGCAG
CCGGATGACG TGCTGGTCGC GCTCGGTTAT GCCGGTTGGG AAAAGGGCCA GTTAGAACAG
GAAGTGCTGG AAAACGCCTG GCTGACCATT GAAGCCGACA CCGACATTCT GTTCCATACG
CCAATCGCCA GCCGCTGGCG TGAAGCCGCC AACCGCCTGG GCATCGACAT CTGCAGCATT
GCCAACCACG CAGGACACGC CTGA
 
Protein sequence
MNLQHHFLIA MPSLQDPRFK RSVIYVCEHN EDGAMGLVIN KPVEQFTVET VLSKLKIMPQ 
ARDPAISLDK PVFAGGPLAD DRGFILHTPR KGFGSSIQIS PDTMITTSKD VLETLGTPEQ
PDDVLVALGY AGWEKGQLEQ EVLENAWLTI EADTDILFHT PIASRWREAA NRLGIDICSI
ANHAGHA