Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4013 |
Symbol | |
ID | 5604750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 4452867 |
End bp | 4454249 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640939573 |
Product | amino acid permease-associated region |
Protein accession | YP_001480236 |
Protein GI | 157372247 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.82914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.390914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGGTC AACAGCATGA TGGCGACCAG CTGAAACGCG GGCTTAAAAA CCGCCATATT CAGCTTATTG CACTAGGGGG CGCTATTGGT ACCGGGCTAT TTCTCGGCAT CGCGCAAACA ATAAAGATGG CCGGCCCTTC GGTCATTCTC GGTTATGCCA TTGGCGGCTT TATCGCATTT CTGATCATGC GCCAACTGGG TGAAATGGTG GTCGAAGAGC CGGTGGCCGG TTCCTTTAGC CACTTCGCCT ATAAATACTG GGGCAACTTC GCCGGCTTCG CTTCCGGCTG GAACTACTGG GTGCTGTACG TCCTGGTTGC CATGGCGGAA CTGACCGCGG TGGGGATCTA TGTGCAGTAC TGGTGGCCGG AGATCCCGAC CTGGGTGTCG GCAGCCGTAT TCTTCCTGGC GATTAATGCC ATCAACCTGG CAAACGTGAA GGTGTATGGC GAGATGGAAT TCTGGTTCGC CATCATCAAG GTCGTGGCGA TTATCGGCAT GATCGTGTTC GGTGCCTACC TGCTGTTCAG CGGCATGGGC GGGCCGGAAG CCACAGTGAC CAATCTGTGG GCGCAGGGCG GGTTCTTCCC GAACGGCGTC ATGGGGCTGG TGATGGCGAT GGCGGTGATC ATGTTCTCGT TCGGTGGGCT GGAGTTGGTG GGCATCACCG CGGCAGAAGC CGACAACCCG CAGAAAAGCA TTCCCAAAGC GACCAACCAG GTTATCTACC GCATCCTGCT GTTCTATATC GGTTCACTGA CCATTCTGTT GTCGCTGTAC CCGTGGGGTA AAGTGGTTGA AGGCGGTAGC CCGTTCGTAC TGATCTTCCA CGCGCTGAAC AGCAACCTGG TAGCAACGGT GCTGAACGTG GTGGTGTTGA CCGCCGCGCT GTCGGTATAC AACAGCTGCG TCTACTGCAA CAGCCGCATG CTGTACGGCC TGGCAAAACA GGGCAACGGG CCGAAAAGCC TGCTGAAAGT CGACGGTCGC GGCGTCCCTG TCATTGCGAT TGCCGTTTCC GCCACCGCCA CGGCGTTCTG CGTACTGATT AACTACCTGA TCCCCGGCCG TGCCTTCGAA CTGCTGATGG CGTTGGTGGT GTCGGCACTG GTGATCAACT GGGCGATGAT CAGCCTGGCA CATCTGAAGT TCCGCGCAGC CAAGAACCGC GAAGGTGTTG AACCGAAGTT CAAAGCCTTC TGGTACCCGT TCAGCAACTA TCTGTGCCTG GTGTTTATGG CCGCTATCCT GGTGATCATG TACCTGACGC CGGGGATCCA AATCTCGGTG TTGCTGATCC CGGTTTGGGT CGCCATTTTA GGCATCGGCT ATGCCATTAA ACAGCGTAGC CAGCGTGCCG TGAGCGCTAC AGGCCGCGGG TAA
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Protein sequence | MDGQQHDGDQ LKRGLKNRHI QLIALGGAIG TGLFLGIAQT IKMAGPSVIL GYAIGGFIAF LIMRQLGEMV VEEPVAGSFS HFAYKYWGNF AGFASGWNYW VLYVLVAMAE LTAVGIYVQY WWPEIPTWVS AAVFFLAINA INLANVKVYG EMEFWFAIIK VVAIIGMIVF GAYLLFSGMG GPEATVTNLW AQGGFFPNGV MGLVMAMAVI MFSFGGLELV GITAAEADNP QKSIPKATNQ VIYRILLFYI GSLTILLSLY PWGKVVEGGS PFVLIFHALN SNLVATVLNV VVLTAALSVY NSCVYCNSRM LYGLAKQGNG PKSLLKVDGR GVPVIAIAVS ATATAFCVLI NYLIPGRAFE LLMALVVSAL VINWAMISLA HLKFRAAKNR EGVEPKFKAF WYPFSNYLCL VFMAAILVIM YLTPGIQISV LLIPVWVAIL GIGYAIKQRS QRAVSATGRG
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