Gene Spro_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3994 
Symbol 
ID5602645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4428834 
End bp4430114 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content52% 
IMG OID640939554 
Productpolysaccharide deacetylase 
Protein accessionYP_001480217 
Protein GI157372228 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTCTA CACACAAGAT AGCGGCTGGG TTACTCGGCA TTCTATTATC CCTTGCCGCC 
CCGGCAAGCC TGGCAAATTT GTTGTCGGAA GACAGTGCCG TTAAATCCGA ATATATGGAA
GCGCAACGCG ACAGTGAGGT TTATTCGCTG ATTGGCGAGC ATGTCATTCC AGTCGGTGAA
GTGAAGCAGG GGCAACTGAT CCAGGTGTTC CCGGCGGATG CGGAATATTA CGAGTTCAAA
TTCGGCCACG GCACGGGTTT TATCGATAAA GACGATGTGC GAGAGCTTAA AAAATCACGC
AAGGTGAAAG ACGATCTGGG GGAGTTGAAT AAACCGCTGA CTAACCAGAA CCTGATCACG
CAGAAGGCGA TCAACGTCTA TACCGATGCG GATAACACCA GCGATGTGTT TGGAGTACTG
GAACAGAACC TGCGCTACCC GATTATCGGC AAGCTGAAAG ATCGGCTCAA CAACACCTGG
TATGAGGTCA ATATTGGCGA TCGCCTGGGT TATGTCAGTG AGCTGGACTG CGAGATTGAC
ACCGGTATAC CGATACTGAC CTATCATCAT CTGCTGAAAA ACGAAGAGAA CAAGCGCTTC
CGCCATACCT CGACGACCAC CTCTGACGTG GCGTTCAGTA ACCAGATGAC CTATCTGAAG
CAGGCGGGCT ACGACACCAT TTCCCTGTAT CAGTTGGAAG CCTACCTGAA AAACCAGATC
AATCTGCCGG GCAGGGCGGT GGTGCTGACA TTTGATGACG GACTGAAATC GGTCTATCGC
TACGCTTACC CGGTCTTGAA GAATTACGGC TTCCGTGCCA CGGCGTTTAT TATTTCTTCA
CGCATCAAGC GTCACCCGCA GAAGTGGAAC CCAGACTCGC TGCAGTTTAT GAGCATTTCC
GAGCTGAAGC AGATTCAGGA CGTGTTCGAC GTGCAGTCGC ATACCCATTT CCTGCATCGT
ACCGACGGTA ATCGTCAACC GATCCTGCTC AGTCGTTCGC TGCACAATAT TGAATTCGAT
TTTGAGCGCT CACGTCGCGC GCTGTCGCAG TTTAATCCGC ATGTGCTGTA TGTCTCCTAC
CCATTTGGCG GCTACAATCA GCGGGCGATA CAGGCTGCGA AAGACGCCGG TTTTCATATG
GCGGTGACCA CGGTGCAGGG CAAGGTGAAA CCGGGGGATA ACCCCTATAC GCTGAAACGG
CTGTATATCT TGCGCACCGA CTCGATTCAG ACCATGGCGG ACAGAATAGC CAATAAGCCA
GGAACGCTGG TGGTGCAATA A
 
Protein sequence
MRSTHKIAAG LLGILLSLAA PASLANLLSE DSAVKSEYME AQRDSEVYSL IGEHVIPVGE 
VKQGQLIQVF PADAEYYEFK FGHGTGFIDK DDVRELKKSR KVKDDLGELN KPLTNQNLIT
QKAINVYTDA DNTSDVFGVL EQNLRYPIIG KLKDRLNNTW YEVNIGDRLG YVSELDCEID
TGIPILTYHH LLKNEENKRF RHTSTTTSDV AFSNQMTYLK QAGYDTISLY QLEAYLKNQI
NLPGRAVVLT FDDGLKSVYR YAYPVLKNYG FRATAFIISS RIKRHPQKWN PDSLQFMSIS
ELKQIQDVFD VQSHTHFLHR TDGNRQPILL SRSLHNIEFD FERSRRALSQ FNPHVLYVSY
PFGGYNQRAI QAAKDAGFHM AVTTVQGKVK PGDNPYTLKR LYILRTDSIQ TMADRIANKP
GTLVVQ