| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3987 |
|---|
| Symbol | pcnB |
|---|
| ID | 5602804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4422287 |
|---|
| End bp | 4423804 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640939547 |
|---|
| Product | poly(A) polymerase I |
|---|
| Protein accession | YP_001480210 |
|---|
| Protein GI | 157372221 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000599452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTAATCC GCGATGACAA GCAACCGCGC GACGATGCGC CGGTCAGCGA TAAAAACGTA
GTCCGCGAAG AAAGCGTGGT GGCGGAACAG CCGGCCGCGC CGCAGCGACG TTCCGTCGAA
CGCGGCAGAG AAAGCCCTGC CCGCCGGCCG GCACCGCGTA AACGCCCCCC TTTTCCTGCC
GCAGAGGGAA CCGGCTCAAT GACCGTGATC CCACGCGACC AGCATTCCAT CTCACGTAAA
GACATCAGTG AGAATGCGCT GAAGGTGCTG TATCGCCTGA ACAAATCCGG CTTCGAAGCC
TATCTGGTCG GTGGCGGCGT ACGCGACCTG CTGCTGGGCA AAAAACCGAA AGATTTCGAC
ATCACCACCA ACGCGACGCC GGAGCAAGTG CGCAAGCTGT TCCGCAACTG CCGTCTGGTT
GGCCGCCGCT TCCGCCTGGC CCACGTGATG TTCGGGCCGG AAATCATTGA GGTTGCCACC
TTCCGTGGTC ACCACGAGCA GCAAACGCCG GAGTCTGACA AAAATTCTTC CCAGCAGGCC
CAAAACGGCA TGCTGCTGCG CGACAACATC TTTGGTTCGA TCGAAGAAGA TGCCCAGCGC
CGCGACTTCA CCATCAACAG CCTGTATTAC GGCGTAGCGG ACTTCACCCT GCGTGATTAC
GTCGATGGCC TGCGCGATCT TAAACAGGGC GTGATCCGCC TGATTGGCGA TCCGGAAACC
CGTTATCGTG AAGACCCGGT GCGTATGCTG CGCGCGGTGC GCTTTGCCGC CAAGCTGGAC
ATGACCATCA GCGATGAAAC CGCCGAGCCA ATCCCGCGTC TGGCGTCCTT GCTGCATGAG
ATCCCGCCGG CGCGTCTGTT TGAGGAATCA CTCAAGCTGC TGCAGGCAGG CTACGGTTAC
CCGACCTATC TGAAACTCTG TGAATACCAG CTGTTCCAGC CGCTGTTCCC GCAGATTGCA
CGTCACTTCA CGCCGGGTCA GGACACGCCA ATGGAGCGTA TTCTGGCGCA GGTGCTGAAG
AACACCGACT ACCGTCTGCA AAACAACATG CGCGTCAATC CGGCGTTCCT GTTTGCTGCT
ATGCTTTGGT ATCCGCTGCT GGAACATGCG CAGAAACTGG CGCAGGAAAG TGGGCTGGCT
TACTACGACG CCTTCGCGCT GGCGATGAAT GATGTGTTGG ACGAGCAGTG TCGTTCGCTG
GCCATTCCGA AACGCATCAC CACGCTGGTT CGCGATATCT GGCAGTTGCA GCTGCGTCTG
TCCCGCCGTC AGGGCAAGCG TGCGCACAAG CTGATGGAAC ATCCGAAATT CCGCGCCGCT
TACGATTTGC TGGCGCTGCG TGCCGAAGTA GAAGAAAACC AGGAGATGCT GCGTCTGACC
GAATGGTGGG GCGAGTTCCA GGAAGCCACA CCGGCACGAC AGAAAACCAT GTTAAGTACT
TTGGGTGACG ATCCGGCACC GCGCCGTGCG CGTCAGCGCC GCCCTCGCCG TCGGACGCCG
CGTAAAGAAG GAGAATAA
|
|---|
| Protein sequence | MLIRDDKQPR DDAPVSDKNV VREESVVAEQ PAAPQRRSVE RGRESPARRP APRKRPPFPA
AEGTGSMTVI PRDQHSISRK DISENALKVL YRLNKSGFEA YLVGGGVRDL LLGKKPKDFD
ITTNATPEQV RKLFRNCRLV GRRFRLAHVM FGPEIIEVAT FRGHHEQQTP ESDKNSSQQA
QNGMLLRDNI FGSIEEDAQR RDFTINSLYY GVADFTLRDY VDGLRDLKQG VIRLIGDPET
RYREDPVRML RAVRFAAKLD MTISDETAEP IPRLASLLHE IPPARLFEES LKLLQAGYGY
PTYLKLCEYQ LFQPLFPQIA RHFTPGQDTP MERILAQVLK NTDYRLQNNM RVNPAFLFAA
MLWYPLLEHA QKLAQESGLA YYDAFALAMN DVLDEQCRSL AIPKRITTLV RDIWQLQLRL
SRRQGKRAHK LMEHPKFRAA YDLLALRAEV EENQEMLRLT EWWGEFQEAT PARQKTMLST
LGDDPAPRRA RQRRPRRRTP RKEGE
|
|---|
| |