Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3986 |
Symbol | |
ID | 5602803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 4421281 |
End bp | 4422192 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640939546 |
Product | glutamate--tRNA ligase |
Protein accession | YP_001480209 |
Protein GI | 157372220 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000239485 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAA GACAATATGT GGGGCGCTTT GCCCCATCGC CTTCCGGAAG CCTGCATTTT GGTTCGCTGA TTGCCGCTCT GGGAAGCTAC CTCCAGGCTC GTGCCCAACG CGGGCAGTGG CTGGTTCGCA TTGAAGATAT CGATCCCCCG CGCGAAGTCG CCGGTGCGGC CGATCGTATC TTATCCGCTC TGGAACACTA TGGTCTCCTC TGGGACGGCC AGGTCATCTA TCAATCCCAA CGTCATGAAG CCTACCGCGC TACTTTGGAT CTACTGCATC AGCAGGGGCT CAGCTATTGC TGCAACTGCA CCCGCAGCCG TATCCAGCAG CTAGGCGGTC TGTATGACGG CCACTGTCGT CATTTGAATC TTGGCCCGCA GGGTGCCGCC ATTCGCTTAC GCCAGTCCAC CCCGGTTTAC GCCTTTCATG ACCGCCTGCA GGGCGAGTTG CAGGCCGACC CGGCGCTGGC ACGGGAAGAC TTTATCATCC GCCGACGCGA TGGGCTGTTC GCCTATAATC TGGCGGTGGT GGTGGACGAC CATTTTCAGG GCGTTACCGA AATTGTGCGT GGTGCCGACC TGATTGAACC GACGGTGCGC CAGATAGCGC TGTACCACCA GTTGCAGGCG CCGGTACCCA CCTATGTACA TCTGCCGCTG GCGCTGGGCG CTAACGGCAG CAAACTGTCG AAGCAAAACC ATGCGCCCGC TCTCCCCGAC GGCGATCCAC GGCCGACCCT GGTGGCCGCG CTGAAATTTC TGCGTCAACC GCTGCCGGAA AGCTGGCAAG ATCTTGACCT GTCGTTATTA TTGAGCTGGG CAGTCGCTCA CTGGAAGCTG GAGGATGTGC CACGCCGGGA GGCTATTTCC CTGGACGAAA ACACATCGGC ATTCTCAAAA GAGCCATGGT GA
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Protein sequence | MQERQYVGRF APSPSGSLHF GSLIAALGSY LQARAQRGQW LVRIEDIDPP REVAGAADRI LSALEHYGLL WDGQVIYQSQ RHEAYRATLD LLHQQGLSYC CNCTRSRIQQ LGGLYDGHCR HLNLGPQGAA IRLRQSTPVY AFHDRLQGEL QADPALARED FIIRRRDGLF AYNLAVVVDD HFQGVTEIVR GADLIEPTVR QIALYHQLQA PVPTYVHLPL ALGANGSKLS KQNHAPALPD GDPRPTLVAA LKFLRQPLPE SWQDLDLSLL LSWAVAHWKL EDVPRREAIS LDENTSAFSK EPW
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