Gene Spro_3985 details

Gene Information

• Locus tag: Spro_3985
• Symbol: dksA
• ID: 5602861
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Serratia proteamaculans 568
• Kingdom: Bacteria
• Replicon accession: NC_009832
• Strand: +
• Start bp: 4420754
• End bp: 4421209
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640939545
• Product: RNA polymerase-binding transcription factor
• Protein accession: YP_001480208
• Protein GI: 157372219
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1734] DnaK suppressor protein
• TIGRFAM ID: [TIGR02420] RNA polymerase-binding protein DksA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000239354
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 44
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAAGAAG GGCAAACCCG TAAAACCTCG TCCTTGAGCA TTCTCGCCAT CGCTGGGGTG 
GAGCCGTACC AAGAGAAGCC GGGCGAAGAG TACATGAACG ACGCCCAGTT GTCGCATTTC 
AAGCGCATTC TTGAAGCATG GCGCAACCAG CTCAGGGATG AAGTGGATCG TACTGTATCT 
CATATGCAGG AAGAGGCAGC CAACTTCCCT GATCCGGCCG ACCGTGCCAC TCAGGAAGAA 
GAGTTCAGTC TTGAACTGCG TAACCGCGAC CGCGAACGCA AACTGATTAA AAAGATCGAG 
AAAACGCTGA AGAAAGTAGA AGACGAAGAT TTCGGCTACT GCGAATCCTG CGGCGTGGAG 
ATCGGCATTC GTCGCCTTGA AGCGCGTCCG ACTGCTGATT TGTGCATCGA CTGCAAGACT 
CTGGCCGAAA TCCGCGAAAA GCAGATGGCA GGCTAA 

 

Protein sequence

MQEGQTRKTS SLSILAIAGV EPYQEKPGEE YMNDAQLSHF KRILEAWRNQ LRDEVDRTVS 
HMQEEAANFP DPADRATQEE EFSLELRNRD RERKLIKKIE KTLKKVEDED FGYCESCGVE 
IGIRRLEARP TADLCIDCKT LAEIREKQMA G