| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3983 |
|---|
| Symbol | |
|---|
| ID | 5602859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4419324 |
|---|
| End bp | 4419866 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640939543 |
|---|
| Product | 2'-5' RNA ligase |
|---|
| Protein accession | YP_001480206 |
|---|
| Protein GI | 157372217 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1514] 2'-5' RNA ligase |
|---|
| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000701591 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCT CGCGCCGCCT GTTTTTCGCC CTGACCTTGC CTGATGCGCT GCAGCAACAG
GTGATCCGCT GGCGCGCCGA AGCCTTCGCG CCGGAAGTCG GCCGGCCGGT CGCGGCAGCC
AATTTACATC TGACGCTGGC CTTTCTTGGT GACGTTTCGG CGCAAAAAGA ATCCGCATTG
AAAAAGCTGG CCGCCCGTAT CAGCCAGCCC GGTTTCAGCA TGGTGCTCGA TGACCTCGGC
CACTGGCCGC GCCCCGGCGT GGTCTGGCTC GGCACCCGGC GGGCACCGCG TGGGCTATTG
CAGTTGGCGG AGCTGTTGCG ATCGCAAGCG GCCCGCAGCG GCTGCTATCA AAACCCCATG
CCGTTTCATC CGCATATCAC CCTGCTGCGC AGCGCAACGC AGCCGGTCGC CGTACCGCCC
GCTACGCCGG GCTGGAACTT CAGCGCTAAC GAATTCGCCC TGTACCAGTC AGTGTTTGAA
AACGGCCGCA CGCGTTATCA GATGCTTGAG CAATGGTCTT TAGCCCATCA GGATACGCCA
TGA
|
|---|
| Protein sequence | MSSSRRLFFA LTLPDALQQQ VIRWRAEAFA PEVGRPVAAA NLHLTLAFLG DVSAQKESAL
KKLAARISQP GFSMVLDDLG HWPRPGVVWL GTRRAPRGLL QLAELLRSQA ARSGCYQNPM
PFHPHITLLR SATQPVAVPP ATPGWNFSAN EFALYQSVFE NGRTRYQMLE QWSLAHQDTP
|
|---|
| |