Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3981 |
Symbol | mrcB |
ID | 5602871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4414196 |
End bp | 4416706 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640939541 |
Product | penicillin-binding protein 1b |
Protein accession | YP_001480204 |
Protein GI | 157372215 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.289458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGGG ATGACCGCGA GCCCATCGGG CGCAAAGGGA AACAACCAAA ACGCACCGCG TCGCGCAAAC CGTCGCGCCG TCGTCGAGAT GACGATTACG ATGATTACGA GGAAGACGAG TACCAGGATG ACGAAGATGA TTATGAAGAC GAGGAAGAAC GCATGCCGCG TAAGGTAAAA GCGACTCCGC CGCGTAAAAA ACGCCGCTGG CTCGGCTTGC TGATCAAACT GATTCTGGTG GTTGCCGTGC TGTTGGCAAT CTACGGCGTT TATCTGGATT CGCAGATCCG CAGCCGCATT GACGGCAAGG TCTGGCAGTT ACCGGCGGCG GTGTATGGCC GCATGGTCAA CCTGGAACCG GGTATGCCGT ACAGCAAAAA GGAAATGGTC GATCTGCTGC AGGGCATGCA ATACCGCCAG GTCAGCCGCA TGACCCGTCC GGGCGAATTT ACCGTACAGG CCAACAGCAT TGAGATGCTG CGTCGTCCAT TTGACTTCCC GGACGGTAAA GAAGGGCAGA TCCACGCCCG TCTGGATTTC CAGAACAACC GCCTGGCGAA AATCGAGAAC ATGGAAAACC AGCGCAGTTT CGGGTTCTTC CGCCTCGATC CGCGCCTGAT CACCATGTTG CAGTCACCTA ACGGTGAACA ACGTCTGTTT GTCCCGCGCG CCGGTTTCCC GGACCTGCTG GTGGACACGT TGATCGCCAC CGAAGACCGT CACTTCTATG AACATGACGG CATCAGCCCA TACTCCATCG GCCGTGCCGT GCTGGCTAAC CTGACCGCCG GGCGTGCGGT GCAGGGCGGC AGTACCCTGA CGCAGCAGCT GGTGAAAAAC CTGTTCCTGA CCAACGAGCG TTCGCTGTGG CGTAAGGCCA ACGAAGCCTA TATGGCGTTG CTGGTGGATT ACCGTTACAG CAAGGATCGT ATCCTTGAGC TGTATCTGAA CGAGGTTTAC CTCGGCCAGA GCGGCAACGA CCAGATCCGC GGTTTCCCGC TGGCCAGCCT GTATTACTTC GGTCGCCCGG TGGATGAACT GAGTCTGGAT CAGCAGGCGC TGCTGGTTGG CATGGTTAAA GGGGCGTCGC TGTATAACCC TTGGCGTAAC CCTAAACTGG CGCTGGAACG TCGTAACCTG GTACTGAAAC TGTTGCAGAA CCAGGGGGTT ATCGATGCCG AACTGTATAA CATGCTCAGC GCCAGGCCGT TGGGCGTGCA GCCGAAAGGT GGGGTGATCA CACCACAGCC GGCGTTTATG CAGATGGTGC GTCAGGAACT GCAAGCCAAG TTGGGCGACA AGGTTAACGA TCTGTCCGGT GTGAAAATCT TCACCACGCT GGATCCGGTT TCGCAGGATG CGGCGGAAAA AGCGGTCGAA GACGGTATTC CGGCATTGAG GGCGGCTCGT CACGTGCAGG ATCTGGAAGC GGCGATGGTG ATTGTCGATC GTTTCAGTGG TGAAGTCCGC GCCATGGTCG GCGGTGCCAA CCCGCAGTTC GCCGGGTTTA ATCGTGCGAT GCAGGCGCGC CGTTTGGTCG GTTCACTGGC CAAGCCACCC ACTTACCTGA CCGCGCTTTC CGAGCCGGAT AAATACCGTT TGAATACCTG GCTGGCCGAT CAGCCGTTGA CGCTGAAACT GCAGAACGGC ACCGTCTGGC AGCCGAACAA CTATGACCGT AAGTTCCGTG GGCAGGTGAT GTTGGTGGAT GGCCTTGCCT TCTCACTCAA CGTGCCGACG GTGAACCTGG GTATGGCGGT TGGGCTGGAT CAAATCAGTG CCACGTTGCA ACGTCTGGGC ATTCCGAAAG CGGAAATCAA TCCGGTACCT TCCATGCTGC TCGGTGCGAT TGGCCTGACG CCGATGGAAG TGGCGCAGGA ATACCAGACC ATCGCCGGTG GCGGTAACCG TGCGACGCTG TCTGCGGTGC GCTCGGTGAT CGCCGAAGAC GGTTCGGTGC TGTACCAGAG CTTCCCGCAG GCGGAACGCG TGGTACCGGC ACAGGCCGCT TATCTGACGC TGTACGCCAT GCAACAGGGT GTCGCACGCG GGACTTCTCG CTCGTTGTCG GTGAAATTCC CCAACTACAA TCTGGCGGCG AAAACCGGTA CCACCAACGA TCTGCGCGAC AGCTGGTTTG CCGGTATTGA TGGCAAGGAA GTGGCTATCG CCTGGGTGGG GCGTGATAAC AACGGCCCGG CCAAACTGAC CGGTGCCAAC GGTGCGCTGA CCCTGTATCG CCGCTATCTG GAAAACCAGA CGCCGCTGCC GCTGATGCTG CAGCCGCCGG AAGGTATCAA CCAGATGGGC ATCGATTCAG GCGGTAACTT TGTCTGTGGC GGCGGCGGGC GCACCATTCC GGTGTGGACC GATAATCCGC AAGGATTGTG TCAGGCAAGC CAGGCAGCTC AGCAACAGCA GCAACAGCAA CAGCAACAGC CGCAGGATGC GGGTGAGCAA AAAGATGCTG ACGGCGTTGC CGGTTGGATC AAGGACATGT TCGGCAAGTA A
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Protein sequence | MAGDDREPIG RKGKQPKRTA SRKPSRRRRD DDYDDYEEDE YQDDEDDYED EEERMPRKVK ATPPRKKRRW LGLLIKLILV VAVLLAIYGV YLDSQIRSRI DGKVWQLPAA VYGRMVNLEP GMPYSKKEMV DLLQGMQYRQ VSRMTRPGEF TVQANSIEML RRPFDFPDGK EGQIHARLDF QNNRLAKIEN MENQRSFGFF RLDPRLITML QSPNGEQRLF VPRAGFPDLL VDTLIATEDR HFYEHDGISP YSIGRAVLAN LTAGRAVQGG STLTQQLVKN LFLTNERSLW RKANEAYMAL LVDYRYSKDR ILELYLNEVY LGQSGNDQIR GFPLASLYYF GRPVDELSLD QQALLVGMVK GASLYNPWRN PKLALERRNL VLKLLQNQGV IDAELYNMLS ARPLGVQPKG GVITPQPAFM QMVRQELQAK LGDKVNDLSG VKIFTTLDPV SQDAAEKAVE DGIPALRAAR HVQDLEAAMV IVDRFSGEVR AMVGGANPQF AGFNRAMQAR RLVGSLAKPP TYLTALSEPD KYRLNTWLAD QPLTLKLQNG TVWQPNNYDR KFRGQVMLVD GLAFSLNVPT VNLGMAVGLD QISATLQRLG IPKAEINPVP SMLLGAIGLT PMEVAQEYQT IAGGGNRATL SAVRSVIAED GSVLYQSFPQ AERVVPAQAA YLTLYAMQQG VARGTSRSLS VKFPNYNLAA KTGTTNDLRD SWFAGIDGKE VAIAWVGRDN NGPAKLTGAN GALTLYRRYL ENQTPLPLML QPPEGINQMG IDSGGNFVCG GGGRTIPVWT DNPQGLCQAS QAAQQQQQQQ QQQPQDAGEQ KDADGVAGWI KDMFGK
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