| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3971 |
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| Symbol | |
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| ID | 5603148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 4399088 |
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| End bp | 4399948 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640939531 |
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| Product | 23S rRNA pseudouridine synthase F |
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| Protein accession | YP_001480194 |
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| Protein GI | 157372205 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCA AACCTTCCAC ACGTCTCAAC AAATATATAA GCGAGAGCGG TATCTGCTCG
CGCCGCGATG CCGATCGTTA CATCGAACAA GGCAATGTTT TTATCAATGG CAAGCGCGTG
ACGCTTGGCG ATCAGGTGTT CCCAGGCGAT GTCGTCAAGG TCAACGGTCA GCTGATTGAA
CCGCGTAATG AAGACAATCT GATCTTTATC GCGTTGAACA AGCCAGTCGG TATTGTCAGC
ACCACGGAAG AAGGCGAGAA AGACAATATT GTCGATTTCG TCAATCACAG CACCCGTATC
TTCCCGATCG GGCGATTGGA TAAAGATTCA CAGGGCCTGA TCTTCCTCAC CAACCACGGC
GATCTGGTGA ACAAGATCCT GCGGGCGGGC AACGACCACG AGAAAGAGTA TTTGGTCACG
GTCAACAAAC CGGTAACCGA TGACTTCATT CGTGGCCTGG GGGCCGGCGT GCCAATGCTG
GGTACGGTGA CCAAAAAGTG CAAGGTGAAG AAAGAAGCGC CATTTGTGTT TCGCATCGTG
CTGGTGCAGG GGCTTAACCG CCAGATCCGC CGTATGTGCG AGCATTTCGG CTATGAGGTG
ACCAAGCTGG AGCGTACCCG CATTATGAAT GTGGGCATGG CCGGGTTGCC TCCGGGTGAA
TGGCGCGACC TAACCGACGA TGAGCTGGTC GAGCTGTTCA AATCGATCGA AGGCTCTTCC
TCGGAAGCCA AGCCGGCGAA GAAAGCCAAA CCGGCGGCGA AAAAGCCCGC CAGTGCGCCG
AAAAGCGTCG AAAAGCCAGC CGGAGGTGCT CCTGCGCGTA AGCGCTTCGC TCAGCCTGGC
CGTAAAAAGA AAGGGCGTTA A
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| Protein sequence | MLTKPSTRLN KYISESGICS RRDADRYIEQ GNVFINGKRV TLGDQVFPGD VVKVNGQLIE
PRNEDNLIFI ALNKPVGIVS TTEEGEKDNI VDFVNHSTRI FPIGRLDKDS QGLIFLTNHG
DLVNKILRAG NDHEKEYLVT VNKPVTDDFI RGLGAGVPML GTVTKKCKVK KEAPFVFRIV
LVQGLNRQIR RMCEHFGYEV TKLERTRIMN VGMAGLPPGE WRDLTDDELV ELFKSIEGSS
SEAKPAKKAK PAAKKPASAP KSVEKPAGGA PARKRFAQPG RKKKGR
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