| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3945 |
|---|
| Symbol | pgk |
|---|
| ID | 5603820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4369641 |
|---|
| End bp | 4370801 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640939505 |
|---|
| Product | phosphoglycerate kinase |
|---|
| Protein accession | YP_001480168 |
|---|
| Protein GI | 157372179 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0126] 3-phosphoglycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.869162 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTAA TTAACATGTC CGATCTGGAT CTGGCCGGTA AACGCGTTCT GATCCGCTCC
GATCTGAACG TTCCAGTGAA AGACGGTAAA GTGACTTCCG ATGCACGTAT CCGTGCCTCC
CTGCCGACTA TTGAAGCTGC GCTGAAACAA GGCGCCCGCG TGATGGTAAC TTCCCACCTG
GGTCGTCCTA CCGAAGGCGA GTACAACGAA GAATTCTCCC TGCTGCCTGT TGTTAACTAT
CTGAAAGAAC ACCTGAAAAA CCCGGTTCGT CTGGCTAAAG ACTACCTGGA AGGTGTTGAC
GTTGCAGAAG GTGAACTGGT AGTGCTGGAA AACGTCCGTT TCAACAAGGG CGAGAAAAAA
GACGACGAAA CCCTTTCCAA AAAATATGCG GCGCTGTGCG ACGTGTATGT GATGGACGCC
TTCGGTACGG CACACCGTGC GCAGGCTTCC ACCCACGGCG TGGGCAAGTT TGCACCTGTC
GCCTGTGCTG GCCCGCTGCT GTCTGCAGAA CTGGAAGCCC TGGGCAAAGC GCTGAAAAGC
CCGGCTCGCC CGATGGTTGC CGTGGTTGGC GGTTCTAAGG TTTCGACTAA ATTCGATGTG
CTGAACTCGC TGGTGAAAAT CGCCGATACG GTGATCGTGG GCGGCGGTAT CGCCAACACC
TTCGTGGCTA TCGATAACAA CGTCGGTAAA TCTCTGTACG AACCTGACTT CGTCGATGCA
GCGAGAAAAC TGCGTGACGA GTTTAAAATT CCGGTTCCTA CCGATTCTCG CGTAGGTACG
GAGTTCTCTG AAACTGCACC TGCCACCTTG AAAAAAGTCA GTGAAGTCAA CGATGATGAA
GAGATCATGG ACTTCGGTGA CGAAACCGCG CTGGCTATGG CCAAGTTGCT CAAAGAAGCC
AAAACCATTC TGTGGAATGG TCCGGTTGGC GTATTCGAGT TCCCTAACTT CCGTAAGGGT
ACCGAAATTG TCGCGCGCGC TATCGCAGAC AGCGAGGCAT TCTCTATCGC TGGTGGTGGT
GATACGCTGG CGGCTATCGA TCTGTTCGGT ATCGAGGATA AGATTTCCTA CATCTCTACC
GGCGGCGGCG CCTTCCTGGA ATTCGTGGAA GGCAAAGCGT TACCGGCAGT TGTGATGCTG
GAAGAGCGCG CTAAGCAGTA A
|
|---|
| Protein sequence | MSVINMSDLD LAGKRVLIRS DLNVPVKDGK VTSDARIRAS LPTIEAALKQ GARVMVTSHL
GRPTEGEYNE EFSLLPVVNY LKEHLKNPVR LAKDYLEGVD VAEGELVVLE NVRFNKGEKK
DDETLSKKYA ALCDVYVMDA FGTAHRAQAS THGVGKFAPV ACAGPLLSAE LEALGKALKS
PARPMVAVVG GSKVSTKFDV LNSLVKIADT VIVGGGIANT FVAIDNNVGK SLYEPDFVDA
ARKLRDEFKI PVPTDSRVGT EFSETAPATL KKVSEVNDDE EIMDFGDETA LAMAKLLKEA
KTILWNGPVG VFEFPNFRKG TEIVARAIAD SEAFSIAGGG DTLAAIDLFG IEDKISYIST
GGGAFLEFVE GKALPAVVML EERAKQ
|
|---|
| |