Gene Spro_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3943 
Symbol 
ID5603818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4367721 
End bp4368389 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content59% 
IMG OID640939503 
Producthypothetical protein 
Protein accessionYP_001480166 
Protein GI157372177 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.816656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGC CATCGTCGAT TCAACACTAT TGGCGGGTCC GCCCCAGGCT GCTGCTTTCC 
GTGGCTGCGG GCATCCTGTG CTACCTGCTG CTGCCGGACA GGCTCGGTCA ATTGCAACGC
CTGATGCTCG GCTGGAACCT GCTGGCCTGG TGCTACCTGC TGTTTCTGTG GCGGTTGATG
CTGGTCAGCA CGCCGAAGCA TATCCGCCAA CTCGCGCGCA CGCAGGATGA AAGCGCCAGT
AAAGTGCTGG CGCTGGTCAG CATTGGCTGC ATGGTGAGCA TTCTGTCGAT TCTGTTTGAG
CTGAGTACCA CCAGGCAGGT CAGCGACTCG CTGAAAACAC TGCATCTGGC GCTGACCGGT
GCCACGCTGG TGGTGTCCTG GCTGCTGCTG CCCACCGCGT TCACCATGCA CTATGCCCAT
CAATTTTATC GTCAGGGCGC GCAGCAAGAT CCTCTGCCAC TGTTGTTTCC CGGTGACCTC
AAAGAACCGA CCTATTGGGA CTTCGCCTAT TTCTCTTTCA CCATTGCCGT GGCGTCGCAA
ACCGCCGACG TGGCGGTCGG CGCGGCCGAG GTGCGCAAAA TCGCCCTGCT GCAATCGGTG
ATTTCCTTTG TCTTCAACCT GATCATCCTC GGGTTGTCGA TCAACGTTGG CGCCAGCCTG
CTGAGCTAG
 
Protein sequence
MQMPSSIQHY WRVRPRLLLS VAAGILCYLL LPDRLGQLQR LMLGWNLLAW CYLLFLWRLM 
LVSTPKHIRQ LARTQDESAS KVLALVSIGC MVSILSILFE LSTTRQVSDS LKTLHLALTG
ATLVVSWLLL PTAFTMHYAH QFYRQGAQQD PLPLLFPGDL KEPTYWDFAY FSFTIAVASQ
TADVAVGAAE VRKIALLQSV ISFVFNLIIL GLSINVGASL LS