Gene Spro_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3938 
Symbol 
ID5603915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4362602 
End bp4363462 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content59% 
IMG OID640939498 
Productputative L-xylulose 5-phosphate 3-epimerase 
Protein accessionYP_001480161 
Protein GI157372172 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3623] Putative L-xylulose-5-phosphate 3-epimerase 
TIGRFAM ID[TIGR00542] hexulose-6-phosphate isomerase, putative 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAGC ACCCATTGGG AATTTATGAA AAAGCCCTGC CGAAACACCT GACCTGGCCC 
GAGCGTCTGG CGCTGGCCAA GGCCTGCGGT TTTGATTTTG TCGAAATGTC GGTGGATGAA
AGTGACGAAC GGCTGGCACG CCTGAGCTGG AGCAAAGAAC AGCGGCTGTC GCTAGTCAGC
GCCATGCTGG AAACCGGCAT CAGCATCCCA TCAATGTGCC TGTCCGGCCA CCGCCGCTTT
CCGTTCGGCA GCCATGACGA TGCGCTGCGC CAACGCGCCT TCGAGGTGAT GGAACAGGCG
ATCCAACTGG CGAAGGACGT AGGTATCCGT ACCATCCAGC TCGCCGGTTA TGACGTCTAT
TACGAACAGC AGGACGAAAG CACCCTCGCC CGCTTCACCG AAGGCATGCA ATGGGCGGTC
GAACGCGCCG CCGCCGCCCA GGTGATGCTG GCGGTGGAGA TCATGGACAC CGCTTTTATG
AACTCAATCA GCAAGTGGAA GGCATGGGAT ACCTGCCTGG CATCGCCGTG GTTCACGGTC
TATCCGGACG TCGGCAACCT CAGCGCCTGG GGCAATGACG TGGCGCAGGA ACTGGCGCTG
GGCATTGACC GCATCGCCGC CATCCATCTG AAAGACACCT ATCCGGTCAC CGAAAGCTCG
CCAGGGCAGT TCCGCGACGT GCCCTTTGGT GAAGGCTGCG TCGACTTCGT CGCGCTATTC
CGCACGCTGA AACAGCTTAA CTATCGCGGC GCTTTCCTGA TCGAGATGTG GACCGAGAAA
GCCGAAGAGC CGGTGGCAGA AATCGTACAG GCACGCCGCT GGATCGAACA AAAAATGCAA
CAAGGGGGTA TGACATGCTA A
 
Protein sequence
MRQHPLGIYE KALPKHLTWP ERLALAKACG FDFVEMSVDE SDERLARLSW SKEQRLSLVS 
AMLETGISIP SMCLSGHRRF PFGSHDDALR QRAFEVMEQA IQLAKDVGIR TIQLAGYDVY
YEQQDESTLA RFTEGMQWAV ERAAAAQVML AVEIMDTAFM NSISKWKAWD TCLASPWFTV
YPDVGNLSAW GNDVAQELAL GIDRIAAIHL KDTYPVTESS PGQFRDVPFG EGCVDFVALF
RTLKQLNYRG AFLIEMWTEK AEEPVAEIVQ ARRWIEQKMQ QGGMTC