Gene Spro_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3930 
Symbol 
ID5603975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4354253 
End bp4355335 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content60% 
IMG OID640939490 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001480153 
Protein GI157372164 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.612132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAA CATCTGTTAA ATCAACGGCA CTGGAACAAA GAGTCAGCCT GTCGCAGGAC 
GGCGCCGGCC CGTGGCTGAT GCAGGTCCTT ACCCGCTACG GCCTGCTGTT GCTGTGCATT
GCGCTGGTGA TCCTGTTTTC ACTGATCTCC CCCACGTTCG CCTCAATGCT GACGCTGCAG
GCGATCCTCT CCAGCAAAGC AAAAATCGCC CTGTTGGCGC TGGCGGCGAC CATCCCGATG
ATCGTCGGCA AAATTGACCT TAACGTCGGC TTCGGCATCG TGCTGTGGCA TATCCTGGCC
ATTACCTTAC AGGTGGAATA CGGCTTTTCG TGGCAGATGG CGGTGCTGAC GGTGCTGGCA
CTCTCCGCGC TGTACGGCCT GTTGAACGGT ATTTTGGTGG CGCTGGCGGA TATCGACAGT
TTCGTCGCCA CCCTCGGTTC AGGCACCGTG CTGTATGCCA TTGCGCTGTG GCACTCCGGC
GGACGACAGA TCGTCGGCGA TCTGCCGGAC GCCTTTATCG CCCTGCACCA CACCGAGATC
GGCGGGATCC CGATCGTGGC GTTCTACGTG TTGATCGTCG CGGTGGTGCT GTGGTTGATC
ACCGAACACA CTCCGCTGGG CCGTTGTATG TATGCCGTTG GCGGTAACCC GGCGGCGGCG
CGGCTGAACG GCATTTCGGT CAATCGCTTT ACCATCGGTG CCTTTATCGC CTCCAGCGTG
CTGACCGGCT TTAGCGGGGT GCTGATCGCC GCCGAGCAGG GTGTTGGCCA GGCCAGCGTC
GGCATGGACT ATCTATTGCC CGCGCTGGTG GGCGCCTTCC TCGGCAGTAC CACCATTCGT
CCCGGTCGGG TTAACGTCTG GGGCACCGTA GTCGGCATCG CCATTCTGGC TATCGGCATC
GCCGGTATCC AGCAGTTCGG CGGCGAGTTC TGGGTCGAAC CGCTGTTTAA CGGTGCGACG
CTGTTGCTGT CAATCACGCT GGCAGGCTAC GCCCAACGCC GTCGGCTACT CAATCAAAAA
GCGGTTCAAC GCAGCCCAGC CATTCCGGCT GATAAAAATA ACCATAAAGC GATCAATCCT
TAA
 
Protein sequence
MSKTSVKSTA LEQRVSLSQD GAGPWLMQVL TRYGLLLLCI ALVILFSLIS PTFASMLTLQ 
AILSSKAKIA LLALAATIPM IVGKIDLNVG FGIVLWHILA ITLQVEYGFS WQMAVLTVLA
LSALYGLLNG ILVALADIDS FVATLGSGTV LYAIALWHSG GRQIVGDLPD AFIALHHTEI
GGIPIVAFYV LIVAVVLWLI TEHTPLGRCM YAVGGNPAAA RLNGISVNRF TIGAFIASSV
LTGFSGVLIA AEQGVGQASV GMDYLLPALV GAFLGSTTIR PGRVNVWGTV VGIAILAIGI
AGIQQFGGEF WVEPLFNGAT LLLSITLAGY AQRRRLLNQK AVQRSPAIPA DKNNHKAINP