Gene Spro_3929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3929 
Symbol 
ID5603974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4352707 
End bp4354260 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content58% 
IMG OID640939489 
ProductABC transporter-related protein 
Protein accessionYP_001480152 
Protein GI157372163 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.992166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCAG AAAATGCGGA ACAACCCATT CTCACCCTCA GCCATATCGT CAAACGCTTT 
GGCGGTAACG TCGCGGTGAA TGACGTCAGC CTGCAGGTGA TGCCGGGCGA AGTCCTGGCC
TTGCTGGGCG AAAATGGCGC GGGCAAATCG ACGCTGATCA AAGTACTGGC CGGGGTTTAC
CCACGCGACG CTGGCGATAT TCAGTTTCAA GGGGCCAGCA TAGCCTCCGC CGCGGCGATA
AAAAGTGACA GCCGCCAGCC TATTGCCTTT ATTCATCAGG ATCTCGGGCT GATCGAATGG
ATGACGGTAG CGGAAAACAT GGCGCTGGTG ATGGGTTTCC CACGTCGTTT CGGCCTGATC
GACTGGCGTG CCATTCGCCG CCGTGCCGTT CAGGCACTGC AGGATGTCGG CATAGAGTTG
GATCCCGACG CCAGAGTCTT CGAACTGTCG CGTACCGAAA AATCGCTGTT GGCGATAGCC
CGGGCGGTCG CGGTCAATGC CGAACTGCTG GTGCTGGATG AACCCACCGC CTCGCTGCCC
GCCAACGATG TGCGCCACCT GTTCGCGGTG ATTAACCGGC TACGTGCCAA AAAAGTCGGC
ATGATTTACG TCACCCATCG GCTGGATGAA GTAATCGAAA TTGCCGACCG GGTGTGCGTT
ATGCGCGACG GCCGTTATGT GGCCGGTGGC AATACCGCCG ATTATTCGCT GCGCGATCTG
GTGCAGATGA TCGTCGGCGA AGCAATGGCT GACGATCAGC GTGAACCTCT GCCTGAAAAT
CGGCCGCCCG TGCTGCAGCT CAATAACGTG GTGGTCGGTG ATATCGGCCC GGTCAGCTTC
AATCTGCAGC CTGGGGAAAT GCTGGCGCTG GCCGGTCTGC GCGGTGCCGG ACAGGAAGAA
ATTGGCCGGT TGCTGTTTGG CCTGCGTCAC GCTGATGAAG GCGAAATCCG CTTTCGCGAG
CAAGGCTACA CTGCCAGCAG CCCACAGCAA GCCATGGCCT GCGGCGTCTC ATTGGTCGCA
GGGGATCGCA CCGGCGAAAG CCTGGTGATG TCGATGAGCG TGCGTGAAAA CCTGTTTATC
AACCCTGTGG CCAGCGGCCA CAAACTGCTG TCACGCTACA GCCGCCGGGC CGAGATCGGG
GCCAGTTGGT GGAAAGTCCA GTTGTTCGAC GTGCGGCCCA AGGACGTCAA TATCGATATC
AGCGCCCTGT CCGGCGGCAA CCAGCAAAAG GTGGTCATGG CACGCTGGAT GCATCTGGGC
GCCCCACTGC TGATCCTGGA AGACCCTACC GCCGGCGTCG ACGTCGGCGC ACGGGCGGAA
ATCTACCATC TGTTAAATAA ATCCCTGGAG GAAGGCGTGG CGGTATTGGT TATCTCCAAC
GACTTTGAGG AGATCGCCCA TATCTGCAAC CGCGCACTGG TATTTAACCG GGGAAAAGTG
GTCGGCGAGC TGAAAAATCA GCAGGTGTCA TTCGCCAATT TATTGGAACT GGCCTCCGCC
AGCGCCGGGG AAACTCTCGA GACAAGATTA GAATCTGAGG TGGGTCATGT CTAA
 
Protein sequence
MTPENAEQPI LTLSHIVKRF GGNVAVNDVS LQVMPGEVLA LLGENGAGKS TLIKVLAGVY 
PRDAGDIQFQ GASIASAAAI KSDSRQPIAF IHQDLGLIEW MTVAENMALV MGFPRRFGLI
DWRAIRRRAV QALQDVGIEL DPDARVFELS RTEKSLLAIA RAVAVNAELL VLDEPTASLP
ANDVRHLFAV INRLRAKKVG MIYVTHRLDE VIEIADRVCV MRDGRYVAGG NTADYSLRDL
VQMIVGEAMA DDQREPLPEN RPPVLQLNNV VVGDIGPVSF NLQPGEMLAL AGLRGAGQEE
IGRLLFGLRH ADEGEIRFRE QGYTASSPQQ AMACGVSLVA GDRTGESLVM SMSVRENLFI
NPVASGHKLL SRYSRRAEIG ASWWKVQLFD VRPKDVNIDI SALSGGNQQK VVMARWMHLG
APLLILEDPT AGVDVGARAE IYHLLNKSLE EGVAVLVISN DFEEIAHICN RALVFNRGKV
VGELKNQQVS FANLLELASA SAGETLETRL ESEVGHV