Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3913 |
Symbol | |
ID | 5604450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4331809 |
End bp | 4335084 |
Gene Length | 3276 bp |
Protein Length | 1091 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640939473 |
Product | outer membrane autotransporter |
Protein accession | YP_001480136 |
Protein GI | 157372147 |
COG category | [S] Function unknown |
COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGGT TGGCTATCGC AATCATTGCG GCTTTACCCT TCTGTTCCGC GCAGGCGGTT GAGAGTTATG AAGTCCGCAA TCACAGCGGA CAAACGGTAT TTAAACTGAA TTTTTACGCT CCCCCCGACG GCAGTTATTT TACGGATGAG GATGGGCCTC AGCGCTCATC CTGGACACTG GATGCCGGAC AAAAGGCCCA GGTGATCAGT GCGGCGCAGC GCTGGGCCGA TATCATTAAA CCCAAGCCCG GCGAATTGCC CGGGGTGATC AATATCGGTA CTTTTGATGA ACAGAATGCC GGAGCATTGA GCCCTGATGT TAGCGAAGCC CCTTTCAGCC TGACCCAACT TCAGGCGGTA TTGCAAGGCC AGGATGCGGG TGAGTTGGAC AGTGGTGCTC ACGCCTTCGT CAGCATCGGT AAACTGAACT TTACCCCGGT ACAGGCCGCG CCTGCGCAGG TCCCGACCGA TTCCCGCTTT GATCTGGAAG TCACCCTATT TCATGAGCTT GCCCATGCGT TAGGGATTAG CACCAGCGCC GGCGTGCCGG ATGATGGCGT GACCCAGTTC GGTCCGACGC AGGGCAGCTG GACATCACAC CTGTTTGACG ACAACGGTAA TCCGGCACGG CCAGGGCAGG CTATTTTATG CAAAGGATGC GAGGGGCCGG ACGATCCTTC AGGCTTTGAC GTGCGCAAAG ACCAGGGCTA TTTTGCCGGC AGTCACGTCA AAGAGGTGCT GGCCGGTGCT ATGCCGGGAG TTCCTGTGCG AATCCTCTTT GAGGATGGCA GTCTGGATGA TGATTACATG TCCCACAGTG AGCTGGACCG CAGTCTGATG AGCCATCAAG ACTACCGCAA CTACACCTCC ATGATGGAAG CCGAACTGGC GGTGTTGCAA GACATGGGAT ACGACATCGA TCGCCGTAAC TTCTTTGGTC GCTCTGTGTA CGGCAGTGGC CTGGATGTGG TTAATCAGCT GGGGTATTTC GCGCGCAATG CCGCAGGAAC TGCGTATCTC GACGGCCAGG CCAATACCGC CGCCCGTGGT GTCGGGTTGC ACATTTACGG CAGTAATAAC CGGGTGGAGC AACGCGGTGA CTTACTGGCC GACGGCGTTG CCGCCGCCGG TATTCGGGTT GACGGTGCGG GCAATACTCT GACCATCGCA CCGGGTACCC GGGTGCAGGC CAACGGTGAT TACGGCACCG GTTTATTGGT GGCCTACGGA GATAACCACA GGATTATCCA GCGCGGCAGC CTGGAGGCGA CCGGCAAAGA AGGCGTCGCC GCCCGGTTGG ATTTCGGCAA CAACCTGCTG GGCAATGAGA GTGAATATCG GGGTTCATAT ATTTGGCTGG TGGGTGGCAC CGATCAGTCC GAAGACATGG CAGGACCATT GGTGTCCAGT TTCGATATCA CCGGCTCGTT AAAGGGGGCC AAAGCGGCTA TTTACCAGTC GGTGAATGCG CTGGCCGGCG CGATTAACGT GATGCGCGGC GCCGATATTC AGGGTGATAT TATTTCTGAT TATGCGCAAT GGGACGAAAA TAATCAGGCG CGGCTCACCC GCTTAACCTT CGGTCTGCAA CCGGATGGGT TGGGGCAGGT GACCGCGCTG GCGGATAGCG GTTTCGACTT CACCTATAAC GGCAACATTC GCGGTAAGGA TAATTTGGCT CTGGTGGCCG AGGGGGGCAA AACCACCCTG AATGGCGAGC ATCAGGTGTA TAGCGTGGAT ATTGAGCCGG GGGCCCAGTT GGCAGGCAAT AGCCGTTATG CGCTGTCGGA TGCCGGGTTG TTCACCAATA ATGGCTTGCT GACGACCGGT TCACCTTTTG GCCAGGTTGC TATCATTGGT GATTACCAGC AGGGGCCACA GGGGCGTTTG CAACTGATGT TCGACAGCCT GGGGCGCGGA GATCAGGTGT CAATCAGTGG CACATCCAGT TTGGACGGTG CCCTGACGCT GATGCCGGTA AAAGGCTGGT ATGCCTCAGA CTGGCAGTTG AACAGCGCTT CGCTGCTGCA ACTGGGACAG GTCAGCGGCG AGTTCGATCA AGTCAGCGTG CAGACGCAGT CACCGACGCT GAGTTTCAGT ACAGCGCCAT TGGCGGCTGG AGAATATCAA ATCAGTGCGA TCCGTGGTGC ATCTGCCTAT AGCCAGTATG CGCAAAGTGC TAATGAGCGA AACATCGGGC TGGCGTTGGC CCGTGCGGCG GCGACGGCGG GTAATGATAT GCGACCGTTG CTGACCGCGC TGGATTTTTC CACCCCTGAT GGCAAGCAGG TGAGCGGCGC TTTGGCGCAG CTGGAGCCGT CGGCCTATAA CAGCCTGATT CAGGCGTCAT TCGATCGCGA ACGCCAATTA ACCCGAGCGT TGACGGCACC GGAACGCAAT CTGACGTTGT CCCCGACCGG CGACGAGCAG GATTGGATCA GTTTTGCCCT GCCTTACGGC GGTGGCACCT GGCAGCATAA TGCGGGCAAT ATCACCGGTT ACAACGCATC GCGTTATGGC GTGCTGTTCG GCGCAGAGAA ACGCAATGTC CTGGTGCCGG GGCTGACAAC CGGCTTCCAC GCTGCGGTTG GTGGGCAAAC GGTCAATGCC AAAAGCGCCG ATCGGGCGCG TGCACACAGC ACGTCATTTG ATGTCGGTCT GCAGTTCAGC TTCGCGCAGG ATCCCATGGC CGGGCCGTTT GCCTATGGCC TGGGGCGTGT AGGCGCGGAG GATAATCATA TGAAGCGTCA GTTTGATGTT GCCGGCGTGA GCGGTACCAG CAAGAGCGAC TGGACGTCGT GGAATGGTTC ATTAGCCCTG GGCGGTGGCT ATCATTTTGC GTTAACCGAG TCGTTTAGCT TCGGCCCGTT GGCGGCACTG GATTATACCG CCAGCAGGCA TCGTACAATT AAAGAGTCCG GGTCTGGTAC CTTGCCGATG CAGATTAAAG GGCATTATGC CGATTCACTG CAAAGCACGC TGGGCGTGGA AGCGTTGTAC CAGGGGCCAC AGGCTTTGTC CGCCACCCTG CGCCTTGGCT GGCAGCATGA GCTGCTGAGC AACAATGTCA CTCAGCGTGC TCAATTCGTC GGTTATGACG CCTCTGCTTT TGATAGCAAG AGCACGTTGG CCGGTCGTGA TGGATTGGCC GCGCAGGCGG GTGTGCAATA TCAGCTGAAC AAAGATGTTT CCTTGGGAGC CGGGCTTTCC AGCGAGCTGT TCCGTCAGGG CAGCAATTCG TTAGAGGGCA ACATGTCCGT GACCTGGCGG TTCTGA
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Protein sequence | MKRLAIAIIA ALPFCSAQAV ESYEVRNHSG QTVFKLNFYA PPDGSYFTDE DGPQRSSWTL DAGQKAQVIS AAQRWADIIK PKPGELPGVI NIGTFDEQNA GALSPDVSEA PFSLTQLQAV LQGQDAGELD SGAHAFVSIG KLNFTPVQAA PAQVPTDSRF DLEVTLFHEL AHALGISTSA GVPDDGVTQF GPTQGSWTSH LFDDNGNPAR PGQAILCKGC EGPDDPSGFD VRKDQGYFAG SHVKEVLAGA MPGVPVRILF EDGSLDDDYM SHSELDRSLM SHQDYRNYTS MMEAELAVLQ DMGYDIDRRN FFGRSVYGSG LDVVNQLGYF ARNAAGTAYL DGQANTAARG VGLHIYGSNN RVEQRGDLLA DGVAAAGIRV DGAGNTLTIA PGTRVQANGD YGTGLLVAYG DNHRIIQRGS LEATGKEGVA ARLDFGNNLL GNESEYRGSY IWLVGGTDQS EDMAGPLVSS FDITGSLKGA KAAIYQSVNA LAGAINVMRG ADIQGDIISD YAQWDENNQA RLTRLTFGLQ PDGLGQVTAL ADSGFDFTYN GNIRGKDNLA LVAEGGKTTL NGEHQVYSVD IEPGAQLAGN SRYALSDAGL FTNNGLLTTG SPFGQVAIIG DYQQGPQGRL QLMFDSLGRG DQVSISGTSS LDGALTLMPV KGWYASDWQL NSASLLQLGQ VSGEFDQVSV QTQSPTLSFS TAPLAAGEYQ ISAIRGASAY SQYAQSANER NIGLALARAA ATAGNDMRPL LTALDFSTPD GKQVSGALAQ LEPSAYNSLI QASFDRERQL TRALTAPERN LTLSPTGDEQ DWISFALPYG GGTWQHNAGN ITGYNASRYG VLFGAEKRNV LVPGLTTGFH AAVGGQTVNA KSADRARAHS TSFDVGLQFS FAQDPMAGPF AYGLGRVGAE DNHMKRQFDV AGVSGTSKSD WTSWNGSLAL GGGYHFALTE SFSFGPLAAL DYTASRHRTI KESGSGTLPM QIKGHYADSL QSTLGVEALY QGPQALSATL RLGWQHELLS NNVTQRAQFV GYDASAFDSK STLAGRDGLA AQAGVQYQLN KDVSLGAGLS SELFRQGSNS LEGNMSVTWR F
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