Gene Spro_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3902 
Symbol 
ID5604843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4321567 
End bp4322892 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content59% 
IMG OID640939462 
Productmajor facilitator transporter 
Protein accessionYP_001480125 
Protein GI157372136 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTT CAACCACACA GCCGTCAATC GCGGAAGCCT CCACTGCCGA GGCTACCGCC 
CACCCGCCAA ACACCGGCAA GCTGGCGGCG GCCAGTTCGA TTGGCACCGC GCTGGAATGG
TATGACTTCA CCGTCTACAA CATCATGGCG GCGCTGATTT TCAACCACGT ATTTTTCCCC
TCTTTCGATC CGCTGGTGGG CACCATTTTG GCGTTTTCCA CTTACGCGGT GGGTTATGTT
TCGCGGCCGA TTGGCGGTAT CGTCTTTGGT CATCTGGGTG ACGTGCTGGG ACGGCGTTTT
GTATTGGTGG CCACGCTGGT GATCATGGGG GTGACAACCG CGCTGATGGG GTTGCTACCC
GGTTATGCCA GCTGGGGGAT TTGGAGCCCG CTGCTGTTGG TGACGCTGCG CTTTATTCAG
GGAATTGCGC TGGGGGGCGA ATGGGCGGGG GCGGTATTGC TGTCGATGGA GCACGGCAAG
CCTCATCAGC GAGGACGCAA CGCCTCCTTT GCTCAGGTTG GCCCTTCCTG CGGAACGCTG
ATCGGCACCG GGCTTATCAC GCTGGTGACG GTGGCGATGA CGGCGGAGGA TTTCCAGCAG
TGGGGCTGGC GTATTCCCTT CCTGCTTAGC CTGGTACTGG TGGTGTTTGG CCTGTGGCTA
CGCCGTGGCG TGGGGGAAAC GCCGGCGTTT CTGAAACTGG AGGCATCGAA GGACGTTACC
CATTCACCAA TCCGCGAAGT TTTCACCCAG CATCGGCGTC CGCTGTTGAT CGCCGGAGGT
TCGCGTATTG GTTCCGACGT GCTGTATGCG CTGGTGGTGG TTTTTACCCT GACCTACGTC
ACCACGGTAC TGAACCTGCC GCGCCCGGTG GCGTTGGCTG CCACCATGTT GGGGGCGATC
GGTAACGCGA TTACCGTGCC GATGTTCGGC GCACTGTCCG ATCGTTTTGG CCGTCGGCCG
GTGTATATCG GTGGGGCTTT GGCGGCGATG GTTTGGGCAT TTGTGTTCTT TATGCTGCTC
GACAGCAGCC AGCCGGTGCT GATCTGCCTG GCGGTGGTGG TCGGTCTGTT GATCCATGCG
GCAATGTATG GCCCGCAGGC GGCCTTTATC ACCGAACAAT TCCCAACCCG GGTACGTTAT
GCGGGGTCGT CGTTGGCTTA TACGTTGGCA GGTATTATCG GCGGTGGCTT TGCGCCGCTG
ATCATCGCCT CATTGTTCAA GTCTTACGAC AGCACGCTGG CTATTTCGGC CTATGTGGTG
CTGGCACTGC TAATCACACT GTGGGCAGTG ATTGCCGCGA AGGAAACGGC ACACAAGCCG
TTATGA
 
Protein sequence
MSTSTTQPSI AEASTAEATA HPPNTGKLAA ASSIGTALEW YDFTVYNIMA ALIFNHVFFP 
SFDPLVGTIL AFSTYAVGYV SRPIGGIVFG HLGDVLGRRF VLVATLVIMG VTTALMGLLP
GYASWGIWSP LLLVTLRFIQ GIALGGEWAG AVLLSMEHGK PHQRGRNASF AQVGPSCGTL
IGTGLITLVT VAMTAEDFQQ WGWRIPFLLS LVLVVFGLWL RRGVGETPAF LKLEASKDVT
HSPIREVFTQ HRRPLLIAGG SRIGSDVLYA LVVVFTLTYV TTVLNLPRPV ALAATMLGAI
GNAITVPMFG ALSDRFGRRP VYIGGALAAM VWAFVFFMLL DSSQPVLICL AVVVGLLIHA
AMYGPQAAFI TEQFPTRVRY AGSSLAYTLA GIIGGGFAPL IIASLFKSYD STLAISAYVV
LALLITLWAV IAAKETAHKP L