Gene Spro_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3896 
Symbol 
ID5605124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4317279 
End bp4317974 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content59% 
IMG OID640939456 
ProductDNA-binding response regulator CreB 
Protein accessionYP_001480119 
Protein GI157372130 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.49169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGA CGCTCTGGCT GGTGGAAGAT GAACCCAGCA TTGCCGACAC GCTGATTTAT 
ACCCTGGAAA GCGAAGGCTT TCAGGTGCGC TGGTTCGAAC GCGGTGAACC GGCATTACAG
GCGTTGGCGC AAGGGGCACC TGCGCTGGCG ATCCTCGATG TTGGTCTGCC GGACATCAAT
GGTTTTGAAC TCTGCCGCCG GTTGTTATCG CAGTCGGCGG ATTTGCCTAT TTTATTTCTC
ACCGCCCGCA GCGATGAGCT TGATCGCCTG ATAGGGTTGG AAATCGGTGC CGATGATTAC
GTCGCCAAAC CCTTTTCCCC GCGAGAAGTC AGCGCCCGGG TGCGCACTAT TCTGCGCCGT
TTGCAAAAAC AGCAGCGCCT GCAGCAGCCG GCTCTGTATC AATTCGGCCC TTTCAGCCTG
GACGAACAGG CCGCGGCCAT CCATTACCAT CAGCAGCCGC TGCTGCTGAC CCGTTACGAA
TTTTTGCTGT TGAAAACGCT GTTGCTGGCG CCCGGCCGGG TATTTTCACG CCAGCAACTG
ATGGAAAGTG TCTGGGCGCT GGCCGAAGAA AGCCTGGATC GCACCGTCGA CACCCATATC
AAAACGTTGC GTGCCAAGCT GCGCGCCATC GATCCCGCTG AACCCCCGAT CCACACTCAT
CGCGGCCTCG GCTACAGCGT GAGCCGCCAG CCATGA
 
Protein sequence
MKPTLWLVED EPSIADTLIY TLESEGFQVR WFERGEPALQ ALAQGAPALA ILDVGLPDIN 
GFELCRRLLS QSADLPILFL TARSDELDRL IGLEIGADDY VAKPFSPREV SARVRTILRR
LQKQQRLQQP ALYQFGPFSL DEQAAAIHYH QQPLLLTRYE FLLLKTLLLA PGRVFSRQQL
MESVWALAEE SLDRTVDTHI KTLRAKLRAI DPAEPPIHTH RGLGYSVSRQ P