| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3894 |
|---|
| Symbol | |
|---|
| ID | 5605176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4314417 |
|---|
| End bp | 4315781 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640939454 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001480117 |
|---|
| Protein GI | 157372128 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4452] Inner membrane protein involved in colicin E2 resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.708894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAT CGATACTGTT TTGGAAAATA ACCACTCTGC TGGGACTAAT GATTTTAATG
ATTATCCCGG TAACGATGTT AATGAATGTG ATTGATGAGC GCAGCGGCTA CCGCCAGAGC
GTGGTTGGGC AGGTCAGTGA AAGCACCAGC CGGGCGCAGC GCATTTTGGG GCCGCTGATC
GTCATCCCTT ACAGCGAGCG GGAAGAGAAG ACGGATGACA AGGGGCAGAA GGTGGTGCAG
ATAGTTCGGC ATCATCGCTA TCTGCTGCCC GAGACGTTGC AGGTCAGCGG CAAGCCGAAC
GTGGAGGTGC GCAAGCTGGG CATTTACCAG ACTCAGGTCT ATCAGGGACC GTTGCAGTTT
AAGGTGAAGT TTGGCCAGCC GGATGTGACA GACCTGCAGC GCAGCAATGT CGTGATTGGC
CAGCCGTTCC TGCTGGTTTC GCTGAGCGAT TCACGCGGCA TCAAGAGCAT CTCGCCGCTT
AGCAGCGCAG AGTCTCAAAC GGTGTTTGAA CCGGGTACCC AGGTAAACGT GTTACCTCAG
GGTATTCATG CACCGCTGAC GCTGCCCGCA TTGCAAAAAG CGGGGCTGGA TGCCGAGTTC
ACCCTGACGC TGGCCGGCAC CAGCAGCCTG TCACTGGTAC CGCTCGGGCG TAGCAGCGAA
TTGACGTTGC AGAGTAATTG GCCACATCCG AATTTCCTCG GTAACTTCTT GCCGGACGAA
CGCAAGGTGA CGGAAAAAGG CTTCAGTGCC CGCTGGCGCA GCACCTGGTT TGCCAACAAC
ATCAACAGTG CTTTCCATTA CGACGACGAA ATTCTTGGCG AAGACAAGTT GCCAACCTTC
AGCACCAGCC TGATTGAACC GGTCGATCAT TATCAACTGA CCGAACGCGC GGTGAAGTAT
GCGGTGCTGT TTATCGGCCT GACATTTATG GCGTTCTTCC TGTTCGAAAC CCTGACCGGC
CTGCGGGTAC ACCCGATTCA GTACCTGCTG GTCGGCACGG CACTGGTGCT GTTCTACCTG
ATCCTGCTGG CATTCTCCGA GCATTTTGGC TTCGCCACCG CTTATCTGCT GGCCAGCATC
GCCTGCAGTG GGTTGATCGC TTTTTACCTC AGCGCGGTAC TGCGTGGCAG GCTGCGGGGG
GCGCTGTTCG CCGCCAGTCT GTTGATGTTG TATGGCGTGC TGTATCTGTT GCTGCAGTCG
GAAGATAACG CGTTGGTGCT GGGGGCAGGG CTGTTGTTCG CTATTTTGGC GGGAATTATG
CTGCTGACGC GTAAGTTGGA CTGGTATCAG GTGGCCGATC CGGCGCGCTT GAACGGAGAA
ACGCCAACCG GCGCGGAGGA GAGCCGCTTC CGGTTGTGGA AATAA
|
|---|
| Protein sequence | MMKSILFWKI TTLLGLMILM IIPVTMLMNV IDERSGYRQS VVGQVSESTS RAQRILGPLI
VIPYSEREEK TDDKGQKVVQ IVRHHRYLLP ETLQVSGKPN VEVRKLGIYQ TQVYQGPLQF
KVKFGQPDVT DLQRSNVVIG QPFLLVSLSD SRGIKSISPL SSAESQTVFE PGTQVNVLPQ
GIHAPLTLPA LQKAGLDAEF TLTLAGTSSL SLVPLGRSSE LTLQSNWPHP NFLGNFLPDE
RKVTEKGFSA RWRSTWFANN INSAFHYDDE ILGEDKLPTF STSLIEPVDH YQLTERAVKY
AVLFIGLTFM AFFLFETLTG LRVHPIQYLL VGTALVLFYL ILLAFSEHFG FATAYLLASI
ACSGLIAFYL SAVLRGRLRG ALFAASLLML YGVLYLLLQS EDNALVLGAG LLFAILAGIM
LLTRKLDWYQ VADPARLNGE TPTGAEESRF RLWK
|
|---|
| |