| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3892 |
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| Symbol | xerD |
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| ID | 5605318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 4312855 |
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| End bp | 4313754 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640939452 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001480115 |
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| Protein GI | 157372126 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.413643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAACAGC AAGAGAGTGC GTTGATTGAG CAATTCCTGG ATGCGCTGTG GCTCGAACGT
AATCTGGCAG AAAATACGCT GGCCTCTTAC CGATTGGATT TGCAGGCGCT GGGTGCCTGG
CTGAATCAGC AAAATACCTC GCTGTTACAG GCACAGGCGC TGGATTTACA GGCGTTTCTC
GCCGATCGGG TGGAGGGAGG ATATAAAGCG ACCAGCTCCG CACGTTTGCT GAGCGCCATG
CGCCGTCTGT TCCAATACCT GTATCGCGAA AATATGCGTA GTGACGATCC CACGGCACTG
CTGGCTTCGC CGAAGCTGCC GCAGCGCCTG CCGAAAGACT TGAGCGAAGC GCAGGTCGAT
GCGCTGCTGA AGGCGCCCTG TGTCGATCAG CCGCTGGAGC TGCGTGACAA GGCGATGCTG
GAAGTGCTGT ACGCTACCGG GTTGCGCGTC TCCGAACTGG TCGGGCTGAC CATCAGCGAT
GTCAGCCTGC GTCAGGGCGT GGTACGGGTG ATAGGTAAAG GCAACAAGGA GCGACTGGTG
CCGCTGGGTG AAGAAGCGGT GTACTGGATA GAAAATTATC TGGAGCACGG CCGCCCGTGG
ATGGTCAACG GCCAGGCGCT GGACGTCTTG TTCCCCAGCA ACCGCAGCCA GCAAATGACC
CGACAGACAT TCTGGCATCG CATCAAACAC TATGCGATCC TAGCGGGTAT TGACAGCGAG
AGGCTGTCGC CGCACGTGTT GCGCCACGCG TTTGCCACCC ATTTGCTGAA CCATGGGGCC
GATCTCCGTG TCGTACAGAT GTTATTGGGG CATAGCGACC TCTCGACCAC ACAAATTTAC
ACGCATGTAG CGACCGAAAG ACTTAAACAG CTACATCAAC AGCACCACCC GCGTGCCTGA
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| Protein sequence | MQQQESALIE QFLDALWLER NLAENTLASY RLDLQALGAW LNQQNTSLLQ AQALDLQAFL
ADRVEGGYKA TSSARLLSAM RRLFQYLYRE NMRSDDPTAL LASPKLPQRL PKDLSEAQVD
ALLKAPCVDQ PLELRDKAML EVLYATGLRV SELVGLTISD VSLRQGVVRV IGKGNKERLV
PLGEEAVYWI ENYLEHGRPW MVNGQALDVL FPSNRSQQMT RQTFWHRIKH YAILAGIDSE
RLSPHVLRHA FATHLLNHGA DLRVVQMLLG HSDLSTTQIY THVATERLKQ LHQQHHPRA
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