| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3869 |
|---|
| Symbol | |
|---|
| ID | 5605921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4282581 |
|---|
| End bp | 4283810 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640939429 |
|---|
| Product | cysteine desulfurase family protein |
|---|
| Protein accession | YP_001480093 |
|---|
| Protein GI | 157372104 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTTA CTCCCGAACT CGCCCGGGCT CAGTTTAGTG CGCTGACCCA ACGCCATGAT
GACAAACCCG TTATCTTTTT CGATGGGCCT GGCGGTTCTC AGGTTTCGCA AGGGGTGCTG
GAGAAAATGA CCCACTACCT GGGGAAATAT AACGCCAATC TGGGCGGACA TTATTTTTCC
AGCCATAAAA CAACCGAGGT GATGGATCAT GCAAGGGAAT CGGTGCGCGC CTTCTTGAAT
GCACCCTCGC CCGATAATAT CGTTTTTGGC ATGAACATGA CCTCGCTGAC GTTCCACCTC
AGCCGCATCA TTAGCCGTAG TTGGCAAGCC GGGGACGAAA TCATCGTTAC CGAGCTGGAT
CACTACGCCA ATGTCTCCAG CTGGCAGCAG GCGGCAAATG ACAAGCAAGT CACCGTGCAT
CAAATCCCTC TGCAACAAGC GGATTGTTCT TTGGATACCG CCCGGCTGTG CGAAAAGATT
ACCGCCAAAA CTCGCCTGGT CGCAGTCAGC TATGCGTCTA ATGTTACGGG CAGCATCGTC
GATATTAAAG CCATCACCGA AGCCGCCCAC CGGGTCGGCG CGCAGGTTTA TGTCGACGCA
GTGCATTATG CTCCGCATAA CCTGATCGAT GTGCAGGCGC TGGGTTGCGA CTTTCTGGTG
TGTTCCGCCT ATAAATTCTT TGGCCCGCAT ATCGGCATGG CCTATATCGC GCCGCAATGG
CTGCAACGGC TGCAGCCCTA TAAAGTCGAG CCGGCCACCG ACATCGGCCC AGGCCGTTTT
GAGACCGGCA CCCAAAGTTT CGAAGGGCTG GCCGGTGTAA CGGCGGCGAT TGATTACCTG
GCGCAATGGG GTACAGCAGG CGCTCCTTTA AGGCAGCGTT TACAGGAAAG TTTTGCCGAC
TATCACCGCC ATGAAGAGAG CCTGTGCAGG TACTTTTTGC AACGCTTATC GCAAATCGAT
GATGTACAAC TCTACGGTTC ACCCGTGGCG GATCCCCAAC GCCGGACGCC CACGTTTGCA
TTGACCTTTA AGCGGCATTC GCCTGAACAG GTTGCCCGCA GGTTAGGCCA ACACAATATC
TGCGTCGGCA GCGGACACTT CTATGCACTG GGGTTAATTC GACGGTTGAA CCTGCAGGAC
AGCGGCGGCG TGCTGCGCAT TGGGATGATG CATTACAATA CTCTGCAAGA AATCGATACT
TTGTTTGAGA TACTTGCCAG CGGAAGGTAG
|
|---|
| Protein sequence | MTFTPELARA QFSALTQRHD DKPVIFFDGP GGSQVSQGVL EKMTHYLGKY NANLGGHYFS
SHKTTEVMDH ARESVRAFLN APSPDNIVFG MNMTSLTFHL SRIISRSWQA GDEIIVTELD
HYANVSSWQQ AANDKQVTVH QIPLQQADCS LDTARLCEKI TAKTRLVAVS YASNVTGSIV
DIKAITEAAH RVGAQVYVDA VHYAPHNLID VQALGCDFLV CSAYKFFGPH IGMAYIAPQW
LQRLQPYKVE PATDIGPGRF ETGTQSFEGL AGVTAAIDYL AQWGTAGAPL RQRLQESFAD
YHRHEESLCR YFLQRLSQID DVQLYGSPVA DPQRRTPTFA LTFKRHSPEQ VARRLGQHNI
CVGSGHFYAL GLIRRLNLQD SGGVLRIGMM HYNTLQEIDT LFEILASGR
|
|---|
| |