Gene Spro_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3863 
Symbol 
ID5605965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4275274 
End bp4276614 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content49% 
IMG OID640939423 
Productanaerobic C4-dicarboxylate transporter 
Protein accessionYP_001480087 
Protein GI157372098 
COG category[R] General function prediction only 
COG ID[COG2704] Anaerobic C4-dicarboxylate transporter 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases
[TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.39327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTTA CCATTCAACT TATTGTCATA CTGATCTGTC TATTTTATGG AGCCAGAAAA 
GGTGGGATTG CACTGGGGCT GCTCGGCGGT ATTGGATTAA TCATCCTGGT TTTCGTTTTT
CATTTACCGC CCGGAAAACC GCCGGTTGAC GTTATGCTGG TTATCATCGC CGTGGTGGCC
GCATCGGCGA CGTTGCAGGC ATCCGGTGGG CTTGACGTGA TGCTGCAGAT TGCCGAGCGT
ATGCTGCGCC GCAATCCTAA ATATGTCTCC ATCGTCGCTC CCTTTGTGAC CTGCATCCTG
ACCATTCTTT GCGGTACCGG GCATGTGGTA TACACCATTT TGCCGATTAT TTATGATGTG
GCAATCAAGA ATAACATTCG CCCGGAAAGG CCGATGGCAG CCAGTTCTAT CGGGGCACAG
ATGGGCATTA TAGCCAGCCC GGTATCCGTC GCTGTGGTGT CGCTGGTCGC CATGTTGGGT
AATTTTACCT TCAATGGCAA GCACCTCGAG TTTCTCGATC TGCTGGCCAT TACTATTCCC
TCGACCCTGT GCGGCATTCT GGCTATTGGT ATATTCAGTT GGTTCCGGGG TAAGGATCTG
GATAAGGATG AAAAGTTCCA AAACTTCATT TCAGACCCAG AAAACTATAA ATACGTTTAT
GGCGAAACGG CAACATTACT GGATAAGAAA TTGCCCACCA GCAACTGGGT GGCTATGTGG
ATTTTTCTGG CTACCATAGC TATTGTTGCG CTATTGGGCG CTTTTTCTGA ACTACGGCCA
TTAATTAATG GAAAACCACT TTCCATGGTA TTGGTCATCC AGATGTTTAT GCTGTGTGCA
GGTGCAGTAA TTATTATCGC GACCAAAACG AACCCGGCCA ATATCTCAAA AAACGAGGTT
TTCCGTTCAG GCATGATTGC CATAGTGGCG GTTTACGGTA TTGCCTGGAT GGCCGAAACC
ATGTTTGGTG CGCATTTGGA AGAGATAAAG TCCGTACTGG GAACCCTGGT TAAAGAGTAT
CCCTGGGCCT ACGCTATCAT TTTGCTGTTG GTTTCCAAGT TTGTTAACTC CCAGGCCGCT
GCACTTGCAG CCATCGTCCC TGTCGCATTG GCTATCGGTG TTGATCCGGC CTATATCGTA
GCTTCTGCTC CCGCCTGCTA TGGCTACTAT ATTTTACCCA CCTACCCAAG CGATTTGGCG
GCTATTCAGT TCGATCGCTC CGGGACAACC AACATCGGAC GGTTCGTCAT CAACCACAGT
TTCATCATGG TGGGTTTGAT CGGGGTTTCC GTATCCTGCG TGATGGGTTG GGTGCTGGCC
GCGGCCTACG GGTTCTTGTA A
 
Protein sequence
MLFTIQLIVI LICLFYGARK GGIALGLLGG IGLIILVFVF HLPPGKPPVD VMLVIIAVVA 
ASATLQASGG LDVMLQIAER MLRRNPKYVS IVAPFVTCIL TILCGTGHVV YTILPIIYDV
AIKNNIRPER PMAASSIGAQ MGIIASPVSV AVVSLVAMLG NFTFNGKHLE FLDLLAITIP
STLCGILAIG IFSWFRGKDL DKDEKFQNFI SDPENYKYVY GETATLLDKK LPTSNWVAMW
IFLATIAIVA LLGAFSELRP LINGKPLSMV LVIQMFMLCA GAVIIIATKT NPANISKNEV
FRSGMIAIVA VYGIAWMAET MFGAHLEEIK SVLGTLVKEY PWAYAIILLL VSKFVNSQAA
ALAAIVPVAL AIGVDPAYIV ASAPACYGYY ILPTYPSDLA AIQFDRSGTT NIGRFVINHS
FIMVGLIGVS VSCVMGWVLA AAYGFL