Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3863 |
Symbol | |
ID | 5605965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4275274 |
End bp | 4276614 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640939423 |
Product | anaerobic C4-dicarboxylate transporter |
Protein accession | YP_001480087 |
Protein GI | 157372098 |
COG category | [R] General function prediction only |
COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.39327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATTTA CCATTCAACT TATTGTCATA CTGATCTGTC TATTTTATGG AGCCAGAAAA GGTGGGATTG CACTGGGGCT GCTCGGCGGT ATTGGATTAA TCATCCTGGT TTTCGTTTTT CATTTACCGC CCGGAAAACC GCCGGTTGAC GTTATGCTGG TTATCATCGC CGTGGTGGCC GCATCGGCGA CGTTGCAGGC ATCCGGTGGG CTTGACGTGA TGCTGCAGAT TGCCGAGCGT ATGCTGCGCC GCAATCCTAA ATATGTCTCC ATCGTCGCTC CCTTTGTGAC CTGCATCCTG ACCATTCTTT GCGGTACCGG GCATGTGGTA TACACCATTT TGCCGATTAT TTATGATGTG GCAATCAAGA ATAACATTCG CCCGGAAAGG CCGATGGCAG CCAGTTCTAT CGGGGCACAG ATGGGCATTA TAGCCAGCCC GGTATCCGTC GCTGTGGTGT CGCTGGTCGC CATGTTGGGT AATTTTACCT TCAATGGCAA GCACCTCGAG TTTCTCGATC TGCTGGCCAT TACTATTCCC TCGACCCTGT GCGGCATTCT GGCTATTGGT ATATTCAGTT GGTTCCGGGG TAAGGATCTG GATAAGGATG AAAAGTTCCA AAACTTCATT TCAGACCCAG AAAACTATAA ATACGTTTAT GGCGAAACGG CAACATTACT GGATAAGAAA TTGCCCACCA GCAACTGGGT GGCTATGTGG ATTTTTCTGG CTACCATAGC TATTGTTGCG CTATTGGGCG CTTTTTCTGA ACTACGGCCA TTAATTAATG GAAAACCACT TTCCATGGTA TTGGTCATCC AGATGTTTAT GCTGTGTGCA GGTGCAGTAA TTATTATCGC GACCAAAACG AACCCGGCCA ATATCTCAAA AAACGAGGTT TTCCGTTCAG GCATGATTGC CATAGTGGCG GTTTACGGTA TTGCCTGGAT GGCCGAAACC ATGTTTGGTG CGCATTTGGA AGAGATAAAG TCCGTACTGG GAACCCTGGT TAAAGAGTAT CCCTGGGCCT ACGCTATCAT TTTGCTGTTG GTTTCCAAGT TTGTTAACTC CCAGGCCGCT GCACTTGCAG CCATCGTCCC TGTCGCATTG GCTATCGGTG TTGATCCGGC CTATATCGTA GCTTCTGCTC CCGCCTGCTA TGGCTACTAT ATTTTACCCA CCTACCCAAG CGATTTGGCG GCTATTCAGT TCGATCGCTC CGGGACAACC AACATCGGAC GGTTCGTCAT CAACCACAGT TTCATCATGG TGGGTTTGAT CGGGGTTTCC GTATCCTGCG TGATGGGTTG GGTGCTGGCC GCGGCCTACG GGTTCTTGTA A
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Protein sequence | MLFTIQLIVI LICLFYGARK GGIALGLLGG IGLIILVFVF HLPPGKPPVD VMLVIIAVVA ASATLQASGG LDVMLQIAER MLRRNPKYVS IVAPFVTCIL TILCGTGHVV YTILPIIYDV AIKNNIRPER PMAASSIGAQ MGIIASPVSV AVVSLVAMLG NFTFNGKHLE FLDLLAITIP STLCGILAIG IFSWFRGKDL DKDEKFQNFI SDPENYKYVY GETATLLDKK LPTSNWVAMW IFLATIAIVA LLGAFSELRP LINGKPLSMV LVIQMFMLCA GAVIIIATKT NPANISKNEV FRSGMIAIVA VYGIAWMAET MFGAHLEEIK SVLGTLVKEY PWAYAIILLL VSKFVNSQAA ALAAIVPVAL AIGVDPAYIV ASAPACYGYY ILPTYPSDLA AIQFDRSGTT NIGRFVINHS FIMVGLIGVS VSCVMGWVLA AAYGFL
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