Gene Spro_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3855 
SymbollldD 
ID5606182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4267073 
End bp4268215 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content62% 
IMG OID640939415 
ProductL-lactate dehydrogenase 
Protein accessionYP_001480079 
Protein GI157372090 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.011848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATCT CCGCTTCAAC CGATTACCGG GCCGCAGCAC AGGCTAAGCT CCCGCCTTTT 
CTGTTTCACT ATATTGACGG CGGGGCCTAC GCGGAACACA CGCTACGACG CAACACGGAA
GACCTGGCGG GCATCGCGCT GCGCCAGCGC ATACTGCGCA ATATGTCCGA CCTCAGCCTG
GAAACCAGCC TGTTCGGTGA AAAACTGGCG ATGCCGGTGA TCCTCGGCCC GGTCGGGTTA
ACCGGTATGT ACGCCCGACG CGGTGAAGTC CAGGCAGCCA AAGCCGCCGC GCAGAAAGGC
ATTCCTTTTA CCCTGTCGAC GGTCTCGGTT TGCCCGATTG AAGAAGTGGC ACCGGCAATC
GATCGGCCGA TGTGGTTCCA GCTGTACGTA TTGAAAGACC GGGGCTTTAT GCGCAATGCG
CTGGAGCGCG CCAAAGCGGC CGGGGTGAAA ACCCTGGTAT TCACCGTCGA TATGCCGGTG
CCCGGTGCGC GTTACCGTGA CGCCCACTCC GGCATGAGTG GCCCCAATGC CGCCGTGCGC
CGCATGTTGC AGGCGGTGAC CCATCCGCAG TGGGCCTGGG ACGTCGGGCT GTGCGGCAAG
CCGCACGATC TGGGCAACGT CTCGGCCTAT CGCGGCAAAC CCACCAGCCT GGAAGACTAT
ATCGGCTGGC TGGGCACCAA CTTCGATCCC TCGATTTCCT GGAAGGATCT GGACTGGATC
CGCGAGTTCT GGCAAGGCCC GATGATCATC AAAGGCATTT TGGATCCCGA AGACGCCAAA
GATGCGGTGC GCTTTGGTGC CGACGGTATT GTGGTATCCA ACCACGGCGG CCGCCAGCTC
GACGGCGTGT TGTCCACTGC CCATGCGCTG CCGGCGATTG CCGAGGCGGT AAAAGGCGAT
ATCACCCTGC TGGCCGACTC TGGCATTCGC AGCGGGCTGG ACGTGGTGCG CATGATTGCT
CTGGGCGCCG ACGGCGTGCT GCTGGGGCGC GCCTTTGCCT ATGCGCTGGC CGCCGCCGGG
CAGGCCGGAG TCGCCAACCT GCTCGAACTG ATCGATAAAG AAATGCGCGT TGCCATGACG
CTGATCGGCG CGAAAACCAT TGCGGACATC AGCGCCGACT CACTGGTCCA GGGGCTGCGT
TAA
 
Protein sequence
MIISASTDYR AAAQAKLPPF LFHYIDGGAY AEHTLRRNTE DLAGIALRQR ILRNMSDLSL 
ETSLFGEKLA MPVILGPVGL TGMYARRGEV QAAKAAAQKG IPFTLSTVSV CPIEEVAPAI
DRPMWFQLYV LKDRGFMRNA LERAKAAGVK TLVFTVDMPV PGARYRDAHS GMSGPNAAVR
RMLQAVTHPQ WAWDVGLCGK PHDLGNVSAY RGKPTSLEDY IGWLGTNFDP SISWKDLDWI
REFWQGPMII KGILDPEDAK DAVRFGADGI VVSNHGGRQL DGVLSTAHAL PAIAEAVKGD
ITLLADSGIR SGLDVVRMIA LGADGVLLGR AFAYALAAAG QAGVANLLEL IDKEMRVAMT
LIGAKTIADI SADSLVQGLR