| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3848 |
|---|
| Symbol | |
|---|
| ID | 5606253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4257892 |
|---|
| End bp | 4259175 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640939408 |
|---|
| Product | tagatose-6-phosphate kinase |
|---|
| Protein accession | YP_001480072 |
|---|
| Protein GI | 157372083 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4573] Predicted tagatose 6-phosphate kinase |
|---|
| TIGRFAM ID | [TIGR02810] D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGT TGTTACAGCT TGTTGAGCAG CACAAGGCCG GAAAACCGGT TGGGGTATTT
TCCGTTTGTT CCGCTCACCC CTGGGTGCTG AAAGCGGCCC TGCGGCAGGC CAAAGCGCGT
GGCACGCCGG TGCTGGTTGA GGCCACCTCG AATCAGGTCA ATCAGTTTGG TGGTTACACC
GGCCAGACGG CGCAGCAGTT CCGCAATGCG CTGTGGCAGT TGGCGGATGA AGTGGGGTTG
GCGCGGGATC GTCTGTGGCT GGGAGGCGAT CATCTCGGTC CCAATGCCTG GCAGGACCGG
CCGGCGGAAG AGGCGATGCA ACTGGCGGAA ACGCTGATCG ACGACTATGT GCGCGCCGGC
TTTCGCAAAA TTCACCTCGA TTGCTCCATG TCCTGCGTTG GCGATCCTTT CCCGCTCAAT
GATGAAACCG TGGCCGTTCG TGCCGCCCGG TTATGTAGCG TCGCGGAACG CGCCTGGCAG
CAAAGCGGCG GCGAGCCACC GGTGTATGTC ATAGGTACCG AAGTGCCGGT GCCGGGCGGC
GCGCAGGAGG CGCTGGAAGG CATGCAGGTC ACCACGCCAC AGGCGGTACA GCAAACGCTT
GAGGTACATC GCCTGGCCTG GCAACGGGCA GAGCTGGTCG ACGCCTGGAC CCGAACCATT
GCGCTGGTGG TGCAGCCGGG CGTGGAGTTT GATCATCACA GCGTAGAACA CTACCAGCCT
AAGCGGGCCC ATGAGCTGAG TCGTTTTATC GAACGGCAGC CGGGCATGGT CTACGAGGCG
CATTCAACGG ACTACCAACC CCCGCAGGCC TATCGGCAAT TGGTGGGCGA CCATTTCGCC
ATCCTGAAAG TCGGCCCGGC GCTGACCTTT GCCCTGCGCG AGGCACTGTT CGCCCTGGAT
CATATTGAAC GTGAATGGCT GGGCGAGCAT CAGTCGGCGC AGCTGTGCGC CACGCTGGAA
CAGGTGATGC GCGAGCAGCC ACAGCAGTGG AGTCGCTATT ACCACGGCAA CCCACATCAA
CAGTATCTGG ATCGCCACTA CAGCCTGAGC GACCGGGTGC GTTACTACTG GCCGCAGCCG
CAGGTTCAGC AGGCGGTAGA AGGTCTGATC GACAACCTGC GCCGCAATCC GGTACCGCTG
GCGTTGTTAA GCCAGTATCT GCCCGAGCAG GCCCGCGCGA TGAATGCCGG CGAATTGAGC
GAGGATCCGC AGGACTGGGT GATGCACAAG GTGACGCAGG TGCTCGATGA TTATCACGCC
GCCTGCTACC CGGAGGTGCA CTGA
|
|---|
| Protein sequence | MQQLLQLVEQ HKAGKPVGVF SVCSAHPWVL KAALRQAKAR GTPVLVEATS NQVNQFGGYT
GQTAQQFRNA LWQLADEVGL ARDRLWLGGD HLGPNAWQDR PAEEAMQLAE TLIDDYVRAG
FRKIHLDCSM SCVGDPFPLN DETVAVRAAR LCSVAERAWQ QSGGEPPVYV IGTEVPVPGG
AQEALEGMQV TTPQAVQQTL EVHRLAWQRA ELVDAWTRTI ALVVQPGVEF DHHSVEHYQP
KRAHELSRFI ERQPGMVYEA HSTDYQPPQA YRQLVGDHFA ILKVGPALTF ALREALFALD
HIEREWLGEH QSAQLCATLE QVMREQPQQW SRYYHGNPHQ QYLDRHYSLS DRVRYYWPQP
QVQQAVEGLI DNLRRNPVPL ALLSQYLPEQ ARAMNAGELS EDPQDWVMHK VTQVLDDYHA
ACYPEVH
|
|---|
| |