Gene Spro_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3838 
Symbol 
ID5606508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4248468 
End bp4249622 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content60% 
IMG OID640939398 
Productmajor facilitator transporter 
Protein accessionYP_001480062 
Protein GI157372073 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTT CTCTGCTCGC ACTGGCATTA AGTGCATTTG CTATCGGCAC CACCGAGTTC 
GTTATTATGG GGTTGCTGCC GGAGGTCGCG AGGGATCTGC AGGTCTCTAT TCCTTCCGCC
GGCTGGTTGA TCAGCGGCTA TGCCCTTGGC GTGGCTATCG GCGCACCGAT CATGGCGCTG
CTGACGGCGA AGCTGCCGCG CAAAAAGACT CTGCTGCTGC TGATGGTGAT TTTCATCTTC
GGCAATATTA TGTGCGCGCT GAGTTACAGC TACGATTTCC TGATGCTGGC GCGCATTATC
ACCGCCCTGT GCCACGGAGC ATTCTTCGGC ATTGGCGCTG TAGTGGCGGC GAATCTGGTG
GCTCCCAACC GTCGGGCTTC CGCCGTGGCG TTGATGTTCA CCGGTCTGAC ATTGGCCAAC
GTGTTGGGGG TGCCCATTGG CACTGCACTG GGGCAAGCAT TGGGCTGGCG CTCAACCTTC
TGGGCGGTGA CGGTGATCGG CGTATTATCC CTGTTGGCGC TGTATAGCAA GCTGCCGACG
GTCAGGGATG AACAACCGAC CGACCTGAAA AAAGAGCTGA CGGCACTGCG CGGCGGCGGC
ATCTGGCTTT CGCTGCTGAT GACCGTGGCC TTTGCCGCAT CGATGTTCGC ACTGTTTACC
TATATTGCCC CGCTGCTGAC CGAAGTGACC GGGGTTTCGT CACATGGCGT GAGTTGGACG
CTGTTGTTGA TGGGGGTTGG CCTGACGCTG GGCAATATCC TTGGCGGCCG TCTGGCAGAC
TGGCGTTTGC CGCTGACCCT GACCTGTACT TTCCTGGTCA TCGCCTGTTT CGCGGCGCTG
TTCAGTTGGA CCAGTCACTC AATGGTGCCG GCGGAAATCA CCCTGTACCT GTGGGCCGCC
GCCGCGTTTG CCGCGGTGCC TGCATTGCAG ATCAACGTGG TGACCTACGG TAAAAAGGCA
CCCAATCTGG TGTCTACGCT AAATATTGCT GCGTTTAACG TTGGCAATGC CATTGGTGCC
TGGGTCGGTG GCGTGGTGAT CGCGCAGGGG CTGGGCTTGA CCAGCGTACC GCTGGCGGCC
GCGGGGATCG CGCTGCTGGG GCTGCTGCTC TGCATAGTGA CCTTCAGCCG CGCCAAGCGC
CCGGCTAGCG TGTAA
 
Protein sequence
MPVSLLALAL SAFAIGTTEF VIMGLLPEVA RDLQVSIPSA GWLISGYALG VAIGAPIMAL 
LTAKLPRKKT LLLLMVIFIF GNIMCALSYS YDFLMLARII TALCHGAFFG IGAVVAANLV
APNRRASAVA LMFTGLTLAN VLGVPIGTAL GQALGWRSTF WAVTVIGVLS LLALYSKLPT
VRDEQPTDLK KELTALRGGG IWLSLLMTVA FAASMFALFT YIAPLLTEVT GVSSHGVSWT
LLLMGVGLTL GNILGGRLAD WRLPLTLTCT FLVIACFAAL FSWTSHSMVP AEITLYLWAA
AAFAAVPALQ INVVTYGKKA PNLVSTLNIA AFNVGNAIGA WVGGVVIAQG LGLTSVPLAA
AGIALLGLLL CIVTFSRAKR PASV