Gene Spro_3829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3829 
Symbol 
ID5606634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4236542 
End bp4237738 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content59% 
IMG OID640939389 
Productlysophospholipid transporter LplT 
Protein accessionYP_001480053 
Protein GI157372064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.105644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.48267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA CGTTACCTAC TGATTCACCT TTGCTTTCTC GCAGTATGAT TGCCGTAATT 
TGCGCCCAGT TTCTGTCCGC ATTCGGTGAC AATGCATTGC TGTTCGCTAC CCTGGCATTG
ATCAAGCAAC AGCTCTACCC CGACTGGAGC CAACCGATTT TGCAGATGGC GTTTGTCGCC
ACCTATATCA TCCTCGCGCC CTTTGTCGGT CAGGTCGCCG ACAGCTTCGC CAAGGGGCGG
GTGATGATGG TGGCCAACGG CCTGAAACTG GCCGGCGCGT TGGTGATCTG TTTCGGGTTT
AATCCGTTCC TCGGCTATAC CCTGGTCGGC GTAGGGGCAG CCGCCTATTC ACCCGCCAAA
TACGGCATTC TGGGTGAGAT CACCAGCGGC GAAAAGCTGG TCAAAGCCAA CGGCCTGATG
GAGGCTTCTA CCATCGCCGC GATCCTGATA GGTTCGGTGG CCGGTGGCAT ATTGGCCGAC
TGGCACATTG TGGCGGCGCT GGCGGTGTGT GCGGTGGTCT ACGCGGCGGC GGTGATCGCC
AATCTGTACA TTCCACGTTT ACCGGCGGCA CATCCTGCCG TTTCCTGGAC GCCGCGTGCC
ATGACGCAGG CTTTCTTCAA CGCCTGTGTG GTGCTGTGGC GCGACGGTCA GACGCGTTTC
TCTTTGATCG GTACCAGTCT GTTTTGGGGG GCCGGGGTCA CGCTGCGCTT CCTGTTGGTG
CTTTGGGTAC CGGTGGCACT CGGTATCGCC GACAATGCTA CGCCGACGTT GCTCAATGCG
ATGGTGGCGG TCGGGATAGT GATAGGCGCC GGGGCAGCCG CACGTTTCGT CACGCTGGAG
ACGGTGAGGC GCTGTATGCC CGCCGGGATC CTGATCGGCG TGGCGGTGGC AATATTCGCC
CTGCAAACCA CCCTGTTTAA CGCTTATGCA CTGCTGTTGA TTATCGGCGT ATTGGGCGGT
TTTTTTGTGG TGCCGTTGAA TGCGCTGTTG CAGGAACGGG GCAAAAATTC AGTGGGGGCA
GGCAATGCGA TCGCGGTACA GAACCTGGGG GAGAACACCG CCATGCTGCT GATGCTGGGG
TTGTATTCGC TGGCCGTTAA AGTTAGCGTG CCGGTGGTCG GCGTGGGAAT TGGCTTTGGC
GTGGTGTTTG CGCTGGCAAT TAGCGCGCTG TGGCTGTCGC AGCGGCGGGC AAAATAG
 
Protein sequence
MNPTLPTDSP LLSRSMIAVI CAQFLSAFGD NALLFATLAL IKQQLYPDWS QPILQMAFVA 
TYIILAPFVG QVADSFAKGR VMMVANGLKL AGALVICFGF NPFLGYTLVG VGAAAYSPAK
YGILGEITSG EKLVKANGLM EASTIAAILI GSVAGGILAD WHIVAALAVC AVVYAAAVIA
NLYIPRLPAA HPAVSWTPRA MTQAFFNACV VLWRDGQTRF SLIGTSLFWG AGVTLRFLLV
LWVPVALGIA DNATPTLLNA MVAVGIVIGA GAAARFVTLE TVRRCMPAGI LIGVAVAIFA
LQTTLFNAYA LLLIIGVLGG FFVVPLNALL QERGKNSVGA GNAIAVQNLG ENTAMLLMLG
LYSLAVKVSV PVVGVGIGFG VVFALAISAL WLSQRRAK