Gene Spro_3824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3824 
Symbol 
ID5606721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4232143 
End bp4232670 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content54% 
IMG OID640939384 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_001480048 
Protein GI157372059 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000167151 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.427646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGATG ATGATGGCTA CCGCCCGAAT GTTGGTATCG TAATCTGTAA TCGTCAGGGG 
CAAGTCCTGT GGGCTCGCCG TTACGGTCAA CACTCCTGGC AGTTTCCCCA AGGTGGGATT
AACCCTGGTG AAACCGCAGA ACAGGCCATG TACCGTGAGC TGTTCGAAGA AGTGGGGCTG
AGTAAAAAGG ATGTCCGTAT CCTGGCCTCA ACCCGCAACT GGTTGCGCTA TAAATTGCCA
AAACGTTTGG TGCGTTGGGA CACAAAGCCG GTTTGTATCG GCCAAAAGCA GAAATGGTTT
CTGTTGCAGT TAATGTGCAA TGACGCTGAT ATCAATATGC AACGCAGCAG CACGCCGGAG
TTTGACGGTT GGCGCTGGGT AAGTTTTTGG TATCCGGTGC GCCAGGTGGT GTCGTTCAAA
CGCGACGTTT ACCGCCGGGT GATGAAAGAA TTCGCCGTCA CCGTGATGCC GATGCAGGAG
CAGGCAGCAC AGCGGCAGAC CCCCGCTTAT CGCCGGAAGA GAGGTTAA
 
Protein sequence
MIDDDGYRPN VGIVICNRQG QVLWARRYGQ HSWQFPQGGI NPGETAEQAM YRELFEEVGL 
SKKDVRILAS TRNWLRYKLP KRLVRWDTKP VCIGQKQKWF LLQLMCNDAD INMQRSSTPE
FDGWRWVSFW YPVRQVVSFK RDVYRRVMKE FAVTVMPMQE QAAQRQTPAY RRKRG