Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3816 |
Symbol | recC |
ID | 5606809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4222563 |
End bp | 4225934 |
Gene Length | 3372 bp |
Protein Length | 1123 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640939376 |
Product | exonuclease V subunit gamma |
Protein accession | YP_001480040 |
Protein GI | 157372051 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.826552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.163807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTAGGG TTTATCATTC CAATCAGTTG GATTTGCTGA AAACGTTAAC CAGCGCGTTG ATAGCCAGAG AGCCATTGGC CGATCCTTTT CAACAGGAAG TGGTGCTGGT GCAGAGCCCG GGTATGGCAC AGTGGCTGCA GATGCAACTG GCTGAGCAGT TCGGCATTGC TGCCAACATC GCTTTTCCAC TGCCGGCTAC CTTCATCTGG GACATGTTTA CCCGGGTGTT ACCGGGTATC CCGAAAGAGA GCGCCTTCAG CAAAGACGCC ATGACCTGGA AGCTGATGTG GCTGCTGCCC GATCTGCTCA CTCAGCCTGA ATTTGCCCCG CTGCAGCATT ACCTCACCGA CGACGGCGAC AAGCGGAAGA TTCACCAGCT TGCCGGCCGG GTCGCCGACC TGTTTGACCA ATATCTGGTG TATCGCCCGC AATGGCTGGA AAGCTGGCAG AAAGGCGAAC GCATTGACGG ACTGGCGGAA GCACAGCAGT GGCAGGCACC ACTGTGGGCG CGACTGGTCG AATACACCCA GGAACTGGGG CAGCCGGAAT GGCATCGTGC CAACCTGTAT CGCCGTTTTA TCAGCGCGTT AGATAAAGCT GAAACCCCAC CTGCGGGGTT GCCGCCGCGG GTATTTATCT GCGGCATCTC GGCCTTGCCG CCGGTCTATC TGGAAGCGCT GCAGGCGCTG GGTAAGCATA TCGATATTCA TCTGATGTTC ACCAACCCCT GCCGCTACTA TTGGGGGGAC ATTCAGAGCC AGTCCTTCCT GGCGAAATTA CAGAGCCGCA AAAGACAGCA TTATCGCGAT AAAACGGAAT ATTCGTTATT CAGGGATCCA GATAACGCCT CTGCATTGTT TAATGACGCC GGCGAGCAAG ACTTGCCGAA CCCGCTGTTG GCCTCATGGG GCAAGTTGGG GCGCGACCAC CATTTTTTAC TTTCGCAGAT CGAGTCCTCA GAAGAGGTTT TTGCCTTTGT GGATATCCCT GCGGACAATC TGTTGCATGG CATTCAGCAC GATATGTTGG AGCTGAAGAA CAGTGCGGTG ATCGGCACCA CCCCGGAAAC GCTGGAGAGC AGCGACACCA AACGTCGACT GGATCCGGCC GATAGGTCTA TCAGCCTGCA CGCCTGCCAT AGCCCGCAGC GTGAGGTAGA GGTGCTGCAT GACCAACTGT TGAGCATGCT GGCGGACGAT CCCGAGCTGA CGCCGCGTGA CATCATCGTG ATGGTGGCGG ATATCGACAG TTACACCCCA TATATTCAGG CGGTATTCGG TAACGCCTCG CCCGAACGCT ATCTGCCGTT TGCCATTTCT GACCGAAAAG CCAGCCAGGC GCACCCGGCG CTACAGGCGT TTATCTCGCT GTTGGATCTG CCGCAGAGCC GCTTTACCTC AGAACAGGTA CTGGCTTTGC TGGAAGTTCC GGCACTGGCG GCGCGTTTCT CCATTCGGGA GGAAGGATTG CGCCTGTTGC GCCATTGGGT TGGTGAGTCT GGCGTGCGCT GGGGGCTGGA TGACGACAAC GTGCGTGAAT TGGATCTGCC CGCTACCGGC CAGCATACCT GGCAATTTGG CATTACACGC ATGTTGCTGG GTTACGCGAT GGACAGCAAT GCCGGTGATT GGCAGGGCGT TTTGCCTTAT GACGAGTCGA GCGGGCTGGT GGCAGAACTG GCCGGGCAAC TGGCGGAACT GCTGGCAGCG CTGAGTCGTT GGCGGCAACG TCTGGGGCAG GCGCGCTCTT TGCCAGAGTG GCAGCCACTG TGTCGTCAAC TGCTTGAGAC CTTTTTTGAG CAGGACGGCG AAACGGAAGT GGTGTTGGCA CTGATAGAGC GGGAGTGGAA CAGGCTGTTT GAGTTCGGGC TGGCGGCGCG TTATCCCGAT GATGTCCCGC TGTCTATCCT GCGGGACGAG TTGGCAGCAC GCCTCGATCA GGAACGCATC AGCCAGCGTT TCCTGGCCGG GCAAATCAAC TTCTGTACGC TGATGCCCAT GCGTTCTATC CCATTCAAAG TGGTTTGCCT GCTGGGTATG AACGACGGGG TTTATCCGCG CACTCTGCCG CCGTTAGGCT TTGATCTGAT GGCGCAACAG GTGAAACGCG GTGACCGCAG CCGCCGTGAT GATGACCGTT ACCTGTTCCT GGAAGCGATT TTGTCGGCTC AGCAACGGCT GTACATCAGC TTTATTGGCC GCTCCATTCA GGATAACAGC GAGCGTTATC CCTCGGTGTT GGTGACTGAA CTGCTGGAGT ATCTGGAGCA AAGTTATTGT CTGCCGGGCG ATGAACATCT GGACGCCGAT GGCAGCGCAC GTCTGGTGGG TAAACACTTG CTTAACTGGC ATTCACGCAT GCCGTTTGCC GCCGAGAACT TCCTGCCCGA TACCGAAGCG CAGAGCTATG CGGCAGAATG GCTGCCTGCC GCCGATCGGC GCGGTGCGGC ACATCCGCCG TTTAATCAGC CCTTGCTGCC GGATGAGAAA ACTCAGGTCT CGCTGGACGA TTTATTACGC TTCTACCGCC ACCCGATCCG CGCCTTCTTC CAACTGCGGC TGGGGGTCAG TTTCATCCTG GAAGAAACCG AACTGCCGGA TGAAGAACCC TTCACCCTGG ATAACCTCAG CCGCTATCAG TTCAACAGCC AACTGCTGAA CACCCTGATT GACGGCGAGG ATGCCAGCCG CCTGTTTCAG CGGGTGCGTG CCGCCGGTGG GTTGCCTTTT GGCCCCTTCG GCGAAATTTA CTGGCAAAAA CAACAAGAAG AGATGAGCGA ACTGGCCGAA CAGGTACGCG CCGAAAGAAG TGAAGGGCAC AGCCTGGAAC TGGATATCGA CATTGCCGGT GTGCGCATCA GCGGCTGGTT ACATCAGGTA CAAGGCGATG GGCTGCTGCG CTGGCGGCCA TCAACCCTAT CGGCAGTCGA TGGCATATTG CTGTGGCTGG AGCATCTGGT GTATTGCTGC GTCGGGGGGA GCGGCGAAAG TCGCATTTAC GGGCGCAAAG GGGCTGTCTG GCGCTTTGCT GCATTAAGCG CGCAAGAGGC CCACGAACAA TTGGCCGAAC TGGTGGCGGG TTATCAGCGC GGCCTGTGTC AGCCGTTGCT GCTGCTGAAC AAAAGCGGCT GGGCGTGGCT GAGCCAGTGC TATCAGCCAC AAACGCAGCA GATTGACTGG GATGAAGAGG TGCAAATCAA GGCCCGGGGC AAGCTGCTGC AAACCTGGCA GGGCGACCAG CGTATTCCGG GCGAAGGTGA AGACCCTTAT GTGCAGCGGG TCTTCCGCCA GTTGGACAAT ATTTATTTAG CGCAAATTCT GGACGAAACA GAACGTTATC TGTTGCCGGT GGCACGGCAT AACCTTGGGT AA
|
Protein sequence | MFRVYHSNQL DLLKTLTSAL IAREPLADPF QQEVVLVQSP GMAQWLQMQL AEQFGIAANI AFPLPATFIW DMFTRVLPGI PKESAFSKDA MTWKLMWLLP DLLTQPEFAP LQHYLTDDGD KRKIHQLAGR VADLFDQYLV YRPQWLESWQ KGERIDGLAE AQQWQAPLWA RLVEYTQELG QPEWHRANLY RRFISALDKA ETPPAGLPPR VFICGISALP PVYLEALQAL GKHIDIHLMF TNPCRYYWGD IQSQSFLAKL QSRKRQHYRD KTEYSLFRDP DNASALFNDA GEQDLPNPLL ASWGKLGRDH HFLLSQIESS EEVFAFVDIP ADNLLHGIQH DMLELKNSAV IGTTPETLES SDTKRRLDPA DRSISLHACH SPQREVEVLH DQLLSMLADD PELTPRDIIV MVADIDSYTP YIQAVFGNAS PERYLPFAIS DRKASQAHPA LQAFISLLDL PQSRFTSEQV LALLEVPALA ARFSIREEGL RLLRHWVGES GVRWGLDDDN VRELDLPATG QHTWQFGITR MLLGYAMDSN AGDWQGVLPY DESSGLVAEL AGQLAELLAA LSRWRQRLGQ ARSLPEWQPL CRQLLETFFE QDGETEVVLA LIEREWNRLF EFGLAARYPD DVPLSILRDE LAARLDQERI SQRFLAGQIN FCTLMPMRSI PFKVVCLLGM NDGVYPRTLP PLGFDLMAQQ VKRGDRSRRD DDRYLFLEAI LSAQQRLYIS FIGRSIQDNS ERYPSVLVTE LLEYLEQSYC LPGDEHLDAD GSARLVGKHL LNWHSRMPFA AENFLPDTEA QSYAAEWLPA ADRRGAAHPP FNQPLLPDEK TQVSLDDLLR FYRHPIRAFF QLRLGVSFIL EETELPDEEP FTLDNLSRYQ FNSQLLNTLI DGEDASRLFQ RVRAAGGLPF GPFGEIYWQK QQEEMSELAE QVRAERSEGH SLELDIDIAG VRISGWLHQV QGDGLLRWRP STLSAVDGIL LWLEHLVYCC VGGSGESRIY GRKGAVWRFA ALSAQEAHEQ LAELVAGYQR GLCQPLLLLN KSGWAWLSQC YQPQTQQIDW DEEVQIKARG KLLQTWQGDQ RIPGEGEDPY VQRVFRQLDN IYLAQILDET ERYLLPVARH NLG
|
| |