Gene Spro_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3816 
SymbolrecC 
ID5606809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4222563 
End bp4225934 
Gene Length3372 bp 
Protein Length1123 aa 
Translation table11 
GC content57% 
IMG OID640939376 
Productexonuclease V subunit gamma 
Protein accessionYP_001480040 
Protein GI157372051 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.826552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.163807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGGG TTTATCATTC CAATCAGTTG GATTTGCTGA AAACGTTAAC CAGCGCGTTG 
ATAGCCAGAG AGCCATTGGC CGATCCTTTT CAACAGGAAG TGGTGCTGGT GCAGAGCCCG
GGTATGGCAC AGTGGCTGCA GATGCAACTG GCTGAGCAGT TCGGCATTGC TGCCAACATC
GCTTTTCCAC TGCCGGCTAC CTTCATCTGG GACATGTTTA CCCGGGTGTT ACCGGGTATC
CCGAAAGAGA GCGCCTTCAG CAAAGACGCC ATGACCTGGA AGCTGATGTG GCTGCTGCCC
GATCTGCTCA CTCAGCCTGA ATTTGCCCCG CTGCAGCATT ACCTCACCGA CGACGGCGAC
AAGCGGAAGA TTCACCAGCT TGCCGGCCGG GTCGCCGACC TGTTTGACCA ATATCTGGTG
TATCGCCCGC AATGGCTGGA AAGCTGGCAG AAAGGCGAAC GCATTGACGG ACTGGCGGAA
GCACAGCAGT GGCAGGCACC ACTGTGGGCG CGACTGGTCG AATACACCCA GGAACTGGGG
CAGCCGGAAT GGCATCGTGC CAACCTGTAT CGCCGTTTTA TCAGCGCGTT AGATAAAGCT
GAAACCCCAC CTGCGGGGTT GCCGCCGCGG GTATTTATCT GCGGCATCTC GGCCTTGCCG
CCGGTCTATC TGGAAGCGCT GCAGGCGCTG GGTAAGCATA TCGATATTCA TCTGATGTTC
ACCAACCCCT GCCGCTACTA TTGGGGGGAC ATTCAGAGCC AGTCCTTCCT GGCGAAATTA
CAGAGCCGCA AAAGACAGCA TTATCGCGAT AAAACGGAAT ATTCGTTATT CAGGGATCCA
GATAACGCCT CTGCATTGTT TAATGACGCC GGCGAGCAAG ACTTGCCGAA CCCGCTGTTG
GCCTCATGGG GCAAGTTGGG GCGCGACCAC CATTTTTTAC TTTCGCAGAT CGAGTCCTCA
GAAGAGGTTT TTGCCTTTGT GGATATCCCT GCGGACAATC TGTTGCATGG CATTCAGCAC
GATATGTTGG AGCTGAAGAA CAGTGCGGTG ATCGGCACCA CCCCGGAAAC GCTGGAGAGC
AGCGACACCA AACGTCGACT GGATCCGGCC GATAGGTCTA TCAGCCTGCA CGCCTGCCAT
AGCCCGCAGC GTGAGGTAGA GGTGCTGCAT GACCAACTGT TGAGCATGCT GGCGGACGAT
CCCGAGCTGA CGCCGCGTGA CATCATCGTG ATGGTGGCGG ATATCGACAG TTACACCCCA
TATATTCAGG CGGTATTCGG TAACGCCTCG CCCGAACGCT ATCTGCCGTT TGCCATTTCT
GACCGAAAAG CCAGCCAGGC GCACCCGGCG CTACAGGCGT TTATCTCGCT GTTGGATCTG
CCGCAGAGCC GCTTTACCTC AGAACAGGTA CTGGCTTTGC TGGAAGTTCC GGCACTGGCG
GCGCGTTTCT CCATTCGGGA GGAAGGATTG CGCCTGTTGC GCCATTGGGT TGGTGAGTCT
GGCGTGCGCT GGGGGCTGGA TGACGACAAC GTGCGTGAAT TGGATCTGCC CGCTACCGGC
CAGCATACCT GGCAATTTGG CATTACACGC ATGTTGCTGG GTTACGCGAT GGACAGCAAT
GCCGGTGATT GGCAGGGCGT TTTGCCTTAT GACGAGTCGA GCGGGCTGGT GGCAGAACTG
GCCGGGCAAC TGGCGGAACT GCTGGCAGCG CTGAGTCGTT GGCGGCAACG TCTGGGGCAG
GCGCGCTCTT TGCCAGAGTG GCAGCCACTG TGTCGTCAAC TGCTTGAGAC CTTTTTTGAG
CAGGACGGCG AAACGGAAGT GGTGTTGGCA CTGATAGAGC GGGAGTGGAA CAGGCTGTTT
GAGTTCGGGC TGGCGGCGCG TTATCCCGAT GATGTCCCGC TGTCTATCCT GCGGGACGAG
TTGGCAGCAC GCCTCGATCA GGAACGCATC AGCCAGCGTT TCCTGGCCGG GCAAATCAAC
TTCTGTACGC TGATGCCCAT GCGTTCTATC CCATTCAAAG TGGTTTGCCT GCTGGGTATG
AACGACGGGG TTTATCCGCG CACTCTGCCG CCGTTAGGCT TTGATCTGAT GGCGCAACAG
GTGAAACGCG GTGACCGCAG CCGCCGTGAT GATGACCGTT ACCTGTTCCT GGAAGCGATT
TTGTCGGCTC AGCAACGGCT GTACATCAGC TTTATTGGCC GCTCCATTCA GGATAACAGC
GAGCGTTATC CCTCGGTGTT GGTGACTGAA CTGCTGGAGT ATCTGGAGCA AAGTTATTGT
CTGCCGGGCG ATGAACATCT GGACGCCGAT GGCAGCGCAC GTCTGGTGGG TAAACACTTG
CTTAACTGGC ATTCACGCAT GCCGTTTGCC GCCGAGAACT TCCTGCCCGA TACCGAAGCG
CAGAGCTATG CGGCAGAATG GCTGCCTGCC GCCGATCGGC GCGGTGCGGC ACATCCGCCG
TTTAATCAGC CCTTGCTGCC GGATGAGAAA ACTCAGGTCT CGCTGGACGA TTTATTACGC
TTCTACCGCC ACCCGATCCG CGCCTTCTTC CAACTGCGGC TGGGGGTCAG TTTCATCCTG
GAAGAAACCG AACTGCCGGA TGAAGAACCC TTCACCCTGG ATAACCTCAG CCGCTATCAG
TTCAACAGCC AACTGCTGAA CACCCTGATT GACGGCGAGG ATGCCAGCCG CCTGTTTCAG
CGGGTGCGTG CCGCCGGTGG GTTGCCTTTT GGCCCCTTCG GCGAAATTTA CTGGCAAAAA
CAACAAGAAG AGATGAGCGA ACTGGCCGAA CAGGTACGCG CCGAAAGAAG TGAAGGGCAC
AGCCTGGAAC TGGATATCGA CATTGCCGGT GTGCGCATCA GCGGCTGGTT ACATCAGGTA
CAAGGCGATG GGCTGCTGCG CTGGCGGCCA TCAACCCTAT CGGCAGTCGA TGGCATATTG
CTGTGGCTGG AGCATCTGGT GTATTGCTGC GTCGGGGGGA GCGGCGAAAG TCGCATTTAC
GGGCGCAAAG GGGCTGTCTG GCGCTTTGCT GCATTAAGCG CGCAAGAGGC CCACGAACAA
TTGGCCGAAC TGGTGGCGGG TTATCAGCGC GGCCTGTGTC AGCCGTTGCT GCTGCTGAAC
AAAAGCGGCT GGGCGTGGCT GAGCCAGTGC TATCAGCCAC AAACGCAGCA GATTGACTGG
GATGAAGAGG TGCAAATCAA GGCCCGGGGC AAGCTGCTGC AAACCTGGCA GGGCGACCAG
CGTATTCCGG GCGAAGGTGA AGACCCTTAT GTGCAGCGGG TCTTCCGCCA GTTGGACAAT
ATTTATTTAG CGCAAATTCT GGACGAAACA GAACGTTATC TGTTGCCGGT GGCACGGCAT
AACCTTGGGT AA
 
Protein sequence
MFRVYHSNQL DLLKTLTSAL IAREPLADPF QQEVVLVQSP GMAQWLQMQL AEQFGIAANI 
AFPLPATFIW DMFTRVLPGI PKESAFSKDA MTWKLMWLLP DLLTQPEFAP LQHYLTDDGD
KRKIHQLAGR VADLFDQYLV YRPQWLESWQ KGERIDGLAE AQQWQAPLWA RLVEYTQELG
QPEWHRANLY RRFISALDKA ETPPAGLPPR VFICGISALP PVYLEALQAL GKHIDIHLMF
TNPCRYYWGD IQSQSFLAKL QSRKRQHYRD KTEYSLFRDP DNASALFNDA GEQDLPNPLL
ASWGKLGRDH HFLLSQIESS EEVFAFVDIP ADNLLHGIQH DMLELKNSAV IGTTPETLES
SDTKRRLDPA DRSISLHACH SPQREVEVLH DQLLSMLADD PELTPRDIIV MVADIDSYTP
YIQAVFGNAS PERYLPFAIS DRKASQAHPA LQAFISLLDL PQSRFTSEQV LALLEVPALA
ARFSIREEGL RLLRHWVGES GVRWGLDDDN VRELDLPATG QHTWQFGITR MLLGYAMDSN
AGDWQGVLPY DESSGLVAEL AGQLAELLAA LSRWRQRLGQ ARSLPEWQPL CRQLLETFFE
QDGETEVVLA LIEREWNRLF EFGLAARYPD DVPLSILRDE LAARLDQERI SQRFLAGQIN
FCTLMPMRSI PFKVVCLLGM NDGVYPRTLP PLGFDLMAQQ VKRGDRSRRD DDRYLFLEAI
LSAQQRLYIS FIGRSIQDNS ERYPSVLVTE LLEYLEQSYC LPGDEHLDAD GSARLVGKHL
LNWHSRMPFA AENFLPDTEA QSYAAEWLPA ADRRGAAHPP FNQPLLPDEK TQVSLDDLLR
FYRHPIRAFF QLRLGVSFIL EETELPDEEP FTLDNLSRYQ FNSQLLNTLI DGEDASRLFQ
RVRAAGGLPF GPFGEIYWQK QQEEMSELAE QVRAERSEGH SLELDIDIAG VRISGWLHQV
QGDGLLRWRP STLSAVDGIL LWLEHLVYCC VGGSGESRIY GRKGAVWRFA ALSAQEAHEQ
LAELVAGYQR GLCQPLLLLN KSGWAWLSQC YQPQTQQIDW DEEVQIKARG KLLQTWQGDQ
RIPGEGEDPY VQRVFRQLDN IYLAQILDET ERYLLPVARH NLG