Gene Spro_3811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3811 
Symbol 
ID5602985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4211180 
End bp4212433 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content55% 
IMG OID640939371 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001480035 
Protein GI157372046 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.145796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000614927 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAAACT CAAATCACAA TCTGGGCCGC CGTCGTTTAT TACAGGGGGT TGCCGCAAGC 
TGGTTGCTGA GTGTGAGTCG CACAGGTTTT GCTGCTTCAT CGCACGTCAT TGCCGTACGC
GTCTGGCCAT CCTCCACCTA TACCCGGGTG ACGCTCGAAT CCAACGTTGA ACTGAAATAT
AAGCAGTTTG CGCTGACCAA TCCCGATCGC GTGGTGGTGG ATATTGAAGG CGTGCAGCTC
AACAGCGTGC TGAAGGGGAT TGTTGGCCAG GTTCGTGCCG ACGATCCCTA CCTGAAACAG
GCGCGCGTTG GTCAGTTTGA TCAAAACACC GTCCGGTTGG TGCTGGAGCT TAAGCGCAGC
GTCAGCCCGC ACATGTTTAC TCTGGCGCCG GTGCCGGAAT ACCGCAATCG TCTGGTGATG
GATCTGTACC CGAGCAAGGG CGGCAGCGGT GAAGACTATG ATCCGCTGTT GGCGTTACTG
GAAGATTACA ACAAGGGCGA TCTTGAGCGC ACATTGCCGG CGGAAGCGCC ACAGGCCGGT
AAGGCGGGGC GTGACCGACC GATTGTCATC ATGCTGGATC CCGGTCACGG CGGCGAAGAT
CCCGGAGCGA TTGGTAAATT CAAAACGCGT GAAAAAGACA TCGTATTGCA GATTGCACGC
CGGCTAAGCA CGTTAATCAA GCGCGAGCCG AATATGAAGG TGTTTATGAC GCGCAATGAA
GACGTCTTCA TTCCGTTGAA GGTGAGGGTG GCGAAGGCGC GTAAGCAGCG TGCCGACCTG
TTTGTGTCCA TCCACGCCGA TGCCTTTACC AGCCGGGCCG CGCGTGGGTC ATCGGTGTTT
GCGCTGTCGA CCAAAGGTGC CACCAGTTCG GCGGCGAAGT TCCTGGCGCA GACCCAAAAT
GAATCGGACC AAATCGGCGG CGTAAGCAAA AGCGGTGACC GCTATCTGGA TCACACCATG
TTTGATCTGA TTCAAACCGC GACCATCAAT GACAGCCTGA AATTCGGTAA GGAAGTGCTG
AACCGGATGG GAAAAATAAA CCGTTTGCAT AAGAATCGTG TCGATCAGGC CGGTTTTGCG
GTATTGAAAG CGCCGGACAT CCCTTCGATT CTGGTTGAGA CGGCGTTTAT CAGCAACATT
GAAGAAGAAC GCAAGCTGCG TACCACTCAT TTCCAGCAGC AGGTGGCGGA ATCTATTCTG
GCGGGTATCA AGGCGTACTT TGCCAACGGT GGTGCGGTAG CGCGCAGAGG GTAA
 
Protein sequence
MPNSNHNLGR RRLLQGVAAS WLLSVSRTGF AASSHVIAVR VWPSSTYTRV TLESNVELKY 
KQFALTNPDR VVVDIEGVQL NSVLKGIVGQ VRADDPYLKQ ARVGQFDQNT VRLVLELKRS
VSPHMFTLAP VPEYRNRLVM DLYPSKGGSG EDYDPLLALL EDYNKGDLER TLPAEAPQAG
KAGRDRPIVI MLDPGHGGED PGAIGKFKTR EKDIVLQIAR RLSTLIKREP NMKVFMTRNE
DVFIPLKVRV AKARKQRADL FVSIHADAFT SRAARGSSVF ALSTKGATSS AAKFLAQTQN
ESDQIGGVSK SGDRYLDHTM FDLIQTATIN DSLKFGKEVL NRMGKINRLH KNRVDQAGFA
VLKAPDIPSI LVETAFISNI EEERKLRTTH FQQQVAESIL AGIKAYFANG GAVARRG