| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3793 |
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| Symbol | dapD |
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| ID | 5607173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 4194637 |
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| End bp | 4195461 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640939350 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001480017 |
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| Protein GI | 157372028 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000408284 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCAAT TACAAAACGT TATTGAAAAC GCCTTCGAAC GCCGTGCGGA AATCACCCCG
GCGAACGCAG ACACCGTAAC GCGCGAAGCG GTAAACCAGG TGATCGCCCT GCTGGACAGC
GGCGCCCTGC GCGTTGCCGA GAAGATTGAC GGTCAGTGGG TAACGCATCA GTGGCTGAAA
AAGGCCGTGC TGCTTTCTTT CCGCATCAAT GACAACAAAG TGATGGACGG TGCCGAAACC
CGTTATTACG ACAAAGTGCC AATGAAATTC GCCGATTACG ACGAAGCGCG CTTCCAGAAA
GAAGGCTTCC GCGTGGTGCC ACCAGCCACC GTTCGCCAGG GCGCGTTCAT CGCCCGTAAT
ACCGTACTGA TGCCATCCTA CGTGAACATC GGTGCCTACG TTGACGAAGG CAGCATGGTG
GATACCTGGG CAACCGTCGG CTCTTGCGCG CAGATCGGCA AAAACGTTCA CCTGTCCGGC
GGCGTCGGCA TCGGTGGCGT ACTGGAGCCA CTGCAGGCCA ACCCGACCAT CATTGAAGAC
AACTGCTTTA TCGGTGCGCG TTCAGAAGTG GTTGAAGGCG TGATCGTGGA AGAAGGTTCA
GTGATCTCCA TGGGCGTGTA CCTGGGCCAG AGCACCCGCA TTTACGACCG TGAAACCGGC
GAAGTGCACT ACGGCCGCGT ACCGGCCGGT TCGGTAGTGG TTTCCGGTAA CCTGCCGTCC
AAAGATGGCT CTTACAGCCT GTATTGCGCG GTCATCGTCA AGAAAGTCGA TGCCAAGACG
CGTGGTAAAG TCGGCATTAA TGAGTTATTA CGCACCATCG ACTAA
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| Protein sequence | MQQLQNVIEN AFERRAEITP ANADTVTREA VNQVIALLDS GALRVAEKID GQWVTHQWLK
KAVLLSFRIN DNKVMDGAET RYYDKVPMKF ADYDEARFQK EGFRVVPPAT VRQGAFIARN
TVLMPSYVNI GAYVDEGSMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED
NCFIGARSEV VEGVIVEEGS VISMGVYLGQ STRIYDRETG EVHYGRVPAG SVVVSGNLPS
KDGSYSLYCA VIVKKVDAKT RGKVGINELL RTID
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