| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3789 |
|---|
| Symbol | tsf |
|---|
| ID | 5607208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4188984 |
|---|
| End bp | 4189835 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640939346 |
|---|
| Product | elongation factor Ts |
|---|
| Protein accession | YP_001480013 |
|---|
| Protein GI | 157372024 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00180508 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATA TTACCGCTGC TCTGGTAAAA GAACTGCGTG AGCGTACTGG CGCTGGCATG
ATGGATTGTA AAAAAGCTCT GGTTGAGTCT AACGGCGACA TCGAGCTGGC AATCGAAAAC
ATGCGTAAAT CTGGTGCGAT CAAAGCGGCG AAAAAAGCAG GCAACGTAGC TGCTGACGGC
GTGATCAAAA CCAAGATTGA AGGCAACTAC GGTCTGATCC TGGAAGTTAA CTGCCAGACT
GACTTCGTAG CTAAAGATGC TGGTTTCCAG GCATTCGCTG ACAAAGTGCT GGATGCTGCT
TTTGCCGGCA AAATCACTGA CGTTGAAGTG TTGAAAGCAC AGTTCGAAGA AGAACGTGTA
GCGCTGGTTG CGAAAATCGG TGAAAACATC AACATCCGTC GCGTTGCTTC CCTGGAAGGC
GAAGTGCTGG GTAGCTACCT GCACGGTGCG CGTATCGGCG TTCTGATCGC AGCTACCGGT
GCTGACGAAG AGCTGGTTAA GCAAATTGCC ATGCACGTTG CGGCAAGCAA GCCTGAATTC
GTTAAGCCTG AAGACGTGTC TGCTGAAGTG GTAGAAAAAG AGTACCAGGT TCAGTTGGAC
ATCGCCATGC AGTCTGGCAA GCCGAAAGAA ATCGCTGAGA AAATGGTTGA AGGCCGCATG
AAGAAATTCA CCGGCGAAGT TTCCCTGACC GGTCAGCCTT TCGTTATCGA ACCAAGCAAA
ACCGTTGGCC AGGTGCTGAA AGAGCACAAC GCTGACGTGG TTAACTTCAT CCGCTTCGAA
GTGGGCGAAG GCATCGCTAA AGTTGAGAAC GACTTTGCTG CTGAAGTTGC AGCAATGAGC
AAGCAGTCTT AA
|
|---|
| Protein sequence | MADITAALVK ELRERTGAGM MDCKKALVES NGDIELAIEN MRKSGAIKAA KKAGNVAADG
VIKTKIEGNY GLILEVNCQT DFVAKDAGFQ AFADKVLDAA FAGKITDVEV LKAQFEEERV
ALVAKIGENI NIRRVASLEG EVLGSYLHGA RIGVLIAATG ADEELVKQIA MHVAASKPEF
VKPEDVSAEV VEKEYQVQLD IAMQSGKPKE IAEKMVEGRM KKFTGEVSLT GQPFVIEPSK
TVGQVLKEHN ADVVNFIRFE VGEGIAKVEN DFAAEVAAMS KQS
|
|---|
| |