Gene Spro_3788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3788 
SymbolpyrH 
ID5607207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4188110 
End bp4188835 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content55% 
IMG OID640939345 
Producturidylate kinase 
Protein accessionYP_001480012 
Protein GI157372023 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0528] Uridylate kinase 
TIGRFAM ID[TIGR02075] uridylate kinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00180508 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACCA ATGCAAAACC CGTATATCAG CGTATTCTGC TTAAACTGAG TGGCGAAGCC 
CTGCAAGGTG CAGAAGGTTT TGGTATCGAC GCTAGCGTTT TGGATCGCAT GGCTCAGGAA
GTTAAAGAGC TGGTCGAACT GGGAATTCAG GTCGGTGTAG TTATTGGCGG CGGTAACCTG
TTCCGCGGCG CGGGCCTGGC ACAAGCCGGC ATGAACCGCG TAGTGGGCGA CCACATGGGA
ATGCTGGCTA CCGTGATGAA CGGTCTGGCT ATGCGTGATG CACTGCACCG TGCCTATGTG
AACGCTCGCC TGATGTCGGC AATTCCGTTG AACGGCGTGT GCGACAACTA CAGCTGGGCC
GAGGCGATCA GCCTGCTGCG TAATAATCGC GTGGTGATCT TCTCCGCCGG TACCGGCAAC
CCGTTCTTCA CTACCGATTC TGCGGCGTGC CTGCGCGGGA TCGAGATTGA AGCGGATGTG
GTATTGAAAG CGACTAAAGT GGATGGTGTA TACTCCGCTG ACCCGGTTAA AAATCCGGAT
GCCACACTGT ACGAACATAT AACCTATCAG GACGTGTTGG AACGTGAGCT GAAAGTGATG
GATCTGGCGG CATTTACGCT GGCTCGCGAT CACGGTCTGC CAATCCGCGT ATTCAACATG
AACAAGCCGG GTGCTCTGCG CCGGGTAGTG ATGGGTGAAA ACGAAGGCAC GCTGATCAGC
AAATAA
 
Protein sequence
MATNAKPVYQ RILLKLSGEA LQGAEGFGID ASVLDRMAQE VKELVELGIQ VGVVIGGGNL 
FRGAGLAQAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARLMSAIPL NGVCDNYSWA
EAISLLRNNR VVIFSAGTGN PFFTTDSAAC LRGIEIEADV VLKATKVDGV YSADPVKNPD
ATLYEHITYQ DVLERELKVM DLAAFTLARD HGLPIRVFNM NKPGALRRVV MGENEGTLIS
K