Gene Spro_3784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3784 
SymbolcdsA 
ID5607295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4184180 
End bp4185028 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content56% 
IMG OID640939341 
ProductCDP-diglyceride synthase 
Protein accessionYP_001480008 
Protein GI157372019 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0388384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0021179 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCTGAAGT ATCGCCTCAT AACTGCTCTG ATCTTAATTC CGATTGTTAT CGCGGCGCTG 
TTTTTGCTGC CGCCGGTGGG CTTTGCCCTG GTAACACTCG TGGTGTGCAT GTTAGCGGCC
TGGGAGTGGG GCCAGCTGGC CGGATTTACC TCCCGCTCGC AGCGCATCTG GTTGGCGATA
TTGTGCGGCT TCCTGCTGGC GTTGATGATG CTCAGTATTC CGGCCTATCA TCAGTCGGTC
CATTTACTTC AGGTAGGCGG CTCGCTGTGG CTGTCAATGG CCTGGTGGCT GGTGGCGCTG
TTGCTGGTGC TGTTTTATCC CGGCTCGGCC GCACTGTGGC GTAACTCACG TCCGATACGT
CTGGTTTTCG GTCTGCTGAC CATAGTGCCG TTCTTCTGGG GTATGCTATC GCTGCGTCAG
TTCGGCTACG AACAAAACCA CTTCACCGGC GCCTGGTGGC TGCTGTATGT GATGTTGCTG
GTTTGGGGGG CGGATTCCGG TGCCTACATG TTCGGCAAAC TGTTCGGCAA GCATAAGCTG
GCACCCAAAG TTTCTCCGGG GAAAACCTGG GAAGGGCTGG TCGGTGGCCT GATTACTTCG
GCCCTGATAT CCTGGCTGTT TGGTCGTTAT GCCCCGCTCA ATGTGGTGCC GACAACCTTA
CTGATTTGTT CGGTGATTGC CGTGCTGGCC TCCGTGCTGG GCGATCTTAC CGAGAGCATG
TTCAAACGCG AAGCGGGTAT CAAAGACAGC GGTCATTTGA TACCGGGTCA TGGCGGCATA
CTGGATCGTA TCGATAGCCT GACCGCAGCA GTGCCTGTAT TTGCCTGCCT GATGCTGTTA
GTGTTTTAA
 
Protein sequence
MLKYRLITAL ILIPIVIAAL FLLPPVGFAL VTLVVCMLAA WEWGQLAGFT SRSQRIWLAI 
LCGFLLALMM LSIPAYHQSV HLLQVGGSLW LSMAWWLVAL LLVLFYPGSA ALWRNSRPIR
LVFGLLTIVP FFWGMLSLRQ FGYEQNHFTG AWWLLYVMLL VWGADSGAYM FGKLFGKHKL
APKVSPGKTW EGLVGGLITS ALISWLFGRY APLNVVPTTL LICSVIAVLA SVLGDLTESM
FKREAGIKDS GHLIPGHGGI LDRIDSLTAA VPVFACLMLL VF