| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3769 |
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| Symbol | |
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| ID | 5603240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 4165625 |
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| End bp | 4167181 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640939326 |
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| Product | DNA-binding transcriptional activator CadC |
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| Protein accession | YP_001479993 |
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| Protein GI | 157372004 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000389639 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0128814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAC CCGTTTTTCG CGTTGGTGAG TGGTTGGTTA CTCCCGCAGA CAACAAAATA
AGCCGTGATG GGCGCCAACT GGCGTTGGAG CCGCGCTTAA TCGATATGCT GCAATATTTC
GCCCGGCACC CGGATGTGGT GCTGAGTCGC GATGAGCTGA TCGATAACGT TTGGAAGCGC
AACATTGTCA CCAACCATGT GGTGACTCAG AGTATTTCCG AACTGCGCAA ATACCTGAAG
GACGGTGACA GCAACAGCCC GGAATACATC ATTACCGTGC CCAAGCGCGG CTATAAGCTG
GCTGCGCCAG TGATGTGGTG TGAAGGGGAA GAGACAGGCA TACCTGCGCT ACCGCGGGTG
GCGGTCATCA CCCATGAGCC GGAAGATGGC AGTGAAGACG ATGACGTTGA TTATCAACCG
CCAAAACCCA GCCAGGCAAA AACATCGCCG GCAAAGTCGA AGGTGGCTTT TTATCGACAA
TCACCGTTCT GGGTGTGGCT GGCTTTCCTG GCGGCATTGA GCGCCTGCGT GGTGTTTGTG
GCCATTGCAA CTTTGTCGCG TCGCATACCG GAATCCACCA TGCCGGTGCT GATGAACCCG
CGGGATATTG ATATCCGCAT TCAGGGGGGC AACAGCTGCA GTAACTGGAC GCCGCAACTT
TCCTATGTCG TCGGCCTGAG CGAAGTAGTC ACGGACTCGC TAAATACCTA TTCCACTTTC
CTGGTGCACG ATCAAACCAA CTATAACTAC ACCGGACCAA GCAGTTCGGG TAAATCGCTG
ACCATTGAGT TCGTCAACCA GCGCCATTAT CGTGCGCAGC AATGTTTCCT GTCGGTACGG
CTGGTGGACA ATGCGGACAG CTCGATCATG CTGGATAAGC GCTACTTCGT TACTACAGAC
AATCAACTGA AAATTCAAGA GGACTTCCTG AGTAGCCTGT CTTTGGCCCT CAATCAGCCG
TGGCCGGCCC CTTTGCAGCA GCGGTTGATG AAACTCTTGC CAAACTCAGG CCCGGAACTG
CAGCAGTATT ACCAGGCACA TCAGTTATTG ATCCAGGGGG ATATCGATTC TTTGACCCAT
GCCAGTCGCA TGCTGGGTGA TATGGTGAAA TCGTCTCCGG ACTTTATTTA TATTGCAGCC
GAAAAAGCGC TGGCAGACTT ACTGCGTAAT TCTTATCAAC CTTTTGATAC TGTGCAGTTG
GCACAACTGG ATACGGAGAT AGCTCGCCTG GATGCGCTGC CCGCTTTAAA AGACAGCCCC
ATAATTCAGC AAATTCATAC GATACGGGCA CTGGGAGAGG GGAAAACCGA TGAGGCTTAT
CAGGCGATAA ATAAAGGCAT CGAGCTGCAG ATGTCATGGA TGAATTATGT GTTGCTCGGT
AAAGTTTATG AAATGCAGGG CTACAATCGC TTGGCTGCAG ATTCCTATAT CACGGCATTT
AACCTGCGTC CGGGCGAGAA TACCCTGCAC TGGATCCGTA ATGCCGTCTT CCATACCTCA
ATAAACACCG TAGTTCCCTA CCTCGAAAAC TACAATCCGG ATAAACAACC CAATTAA
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| Protein sequence | MQEPVFRVGE WLVTPADNKI SRDGRQLALE PRLIDMLQYF ARHPDVVLSR DELIDNVWKR
NIVTNHVVTQ SISELRKYLK DGDSNSPEYI ITVPKRGYKL AAPVMWCEGE ETGIPALPRV
AVITHEPEDG SEDDDVDYQP PKPSQAKTSP AKSKVAFYRQ SPFWVWLAFL AALSACVVFV
AIATLSRRIP ESTMPVLMNP RDIDIRIQGG NSCSNWTPQL SYVVGLSEVV TDSLNTYSTF
LVHDQTNYNY TGPSSSGKSL TIEFVNQRHY RAQQCFLSVR LVDNADSSIM LDKRYFVTTD
NQLKIQEDFL SSLSLALNQP WPAPLQQRLM KLLPNSGPEL QQYYQAHQLL IQGDIDSLTH
ASRMLGDMVK SSPDFIYIAA EKALADLLRN SYQPFDTVQL AQLDTEIARL DALPALKDSP
IIQQIHTIRA LGEGKTDEAY QAINKGIELQ MSWMNYVLLG KVYEMQGYNR LAADSYITAF
NLRPGENTLH WIRNAVFHTS INTVVPYLEN YNPDKQPN
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