Gene Spro_3727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3727 
Symbol 
ID5607407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4114633 
End bp4115373 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content60% 
IMG OID640939279 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001479951 
Protein GI157371962 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CCACCCAACA AGTAGCCATC GTAACCGGCG CATCACGCGG CATCGGTGCC 
GCCATCGCCG AACGGCTGGC CGCCGACGGT ATGACAGTGA TCGTCAATTA TTCAGGTAAT
CAGGCTTTGG CCGATCAACT GGTGCGCAAA ATCGAGCAAA ATGGCGGCCG CGCGCTGAGC
GCCAAAGCGG ACGTCAGCGA TGCCGCAGCG GTGGCAAAAA TGTTTGACCA CGCCGAACAG
GCCTTCGGCG GCGTGGATAT TTTGGTCAAC AACGCCGGGG TAATTGCATT GGCCCCGGTG
GCGGAAATGA GCGATGCCGA TGCCGATCGG CTGATCGACA TCAACCTGAA GGGCACCTTT
AATACCCTGC GTGAAGCGGC GAAACGTCTG CGCGACAATG GCCGCATCAT CAATTTTTCT
TCCAGCGTGG TCGGGTTGTT GCAGCCGGGC TACGGCATGT ACGCCGCCAG CAAGGCCGCC
GTTGAGGCGC TGACCAGCGT GCTGGCGAAA GAGCTGCGCG GGCGTAATAT CACCGTCAAT
GCGATAGCGC CAGGCCCGAC CGCCACCGGA TTGTTCCTGG ACGGTAAAAC GCCAGAGCTT
GTCGAACGTC TGGCGAAAAT GGCACCGCTG GAGCGTCTGG GCCAGCCGCA GGATATCGCC
GCGGCGGTAT CATTCCTGGC CGGTGCCGAC GGTGCCTGGA TCAACGGCCA AACCTTGCGT
GCCAACGGTG GCATTATCTG A
 
Protein sequence
MNTTTQQVAI VTGASRGIGA AIAERLAADG MTVIVNYSGN QALADQLVRK IEQNGGRALS 
AKADVSDAAA VAKMFDHAEQ AFGGVDILVN NAGVIALAPV AEMSDADADR LIDINLKGTF
NTLREAAKRL RDNGRIINFS SSVVGLLQPG YGMYAASKAA VEALTSVLAK ELRGRNITVN
AIAPGPTATG LFLDGKTPEL VERLAKMAPL ERLGQPQDIA AAVSFLAGAD GAWINGQTLR
ANGGII