| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3679 |
|---|
| Symbol | |
|---|
| ID | 5606711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4071880 |
|---|
| End bp | 4073205 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640939230 |
|---|
| Product | ATP-dependent RNA helicase SrmB |
|---|
| Protein accession | YP_001479903 |
|---|
| Protein GI | 157371914 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0397087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.205211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTAA CCAATTTTTC CGAGCTCGAA CTCGATGAAC GCCTGATAAA CGCCCTGCGT
GATAAAGGCT ACGAACGCCC AACCGCCATT CAAGCCGAGG CGATCCCGCC TGCGATGGAT
GGGCGCGACG TATTGGGTTC GGCGCCGACC GGCACCGGCA AGACCGCTGC ATTTTTGCTG
CCGGTATTGC AACATCTGCT CGACTTCCCA CGCAAGAAGT CCGGCCCACC GCGCGTACTG
ATCCTGACCC CGACACGCGA GCTGGCGATG CAGGTAGCCG ATCAGGCACG TGAACTGGCT
GCTCATACTT CGCTGGATAT CGCTACCATC ACCGGTGGCG TTGCCTATAT GAACCACGCG
GAAGTCTTCA GCGAAAACCA GGACGTGGTC GTTGCCACTA CCGGTCGTTT GCTGCAGTAC
ATTAAAGAAG AAAACTTCGA CTGCCGCGCG GTAGAAACGC TGATCCTTGA TGAAGCCGAC
CGTATGCTGG ACATGGGCTT CGCGCAGGAC ATCGAAACTA TTTCCGCCGA AACCCGCTGG
CGGAACCAGA CCCTGCTGTT CTCCGCGACG CTGGAAGGTG ATGCCATCCG CGAGTTCGCC
GAACGCATTC TGAAAGAGCC GGTAGAAGTC GAAGCTGACC CGTCACGCCG TGAACGCAAA
AAGATCCTGC AGTGGTACTA CCGCGCCGAC GACGTGGTGC ATAAAACCGC CCTGCTGGTG
CATTTGCTGA AACAACCGGA CGTGCAGAAA TCCGTAATCT TCGTGCGTAA GCGTGAGCGC
GTGCATGAGC TGGCAGCCTG GCTGCGCGAG GCCGGTATCA ATACCTGTTA CCTCGAAGGC
GAAATGGTGC AGGCCAAGCG TAACGAAGCG GTAAAACGCA TGATGGATGG CCGTGTCAAC
GTACTGGTCG CCACCGACGT TGCTGCCCGT GGCCTGGATA TCCTGGATAT CACCCACGTA
TTCAACTTCG ACATGCCGCG CACGGCGGAT ACCTACCTGC ACCGCATCGG CCGTACCGGT
CGTGCCGGGC GTAAAGGCAC CGCGATCTCG CTGGTTGAGG CACACGACCA CCTGCTGTTG
GGCAAAGTAG GCCGTTACCT GAACGAGCCG CTGAAAGCGC GGGTGATCGA AGAGCTGCGT
CCGTCAACCA AAGTACCGAG CGAAAAAAGC AACGGCAAGC CTTCCAAGAA GGTGATTGCC
AAACGCGCAG CCGACAAAGA AAAGAACAAA GAAAAAGCCA AGGTGAAAGT ACGTCATCGC
GATGCGAAAA ACGTGGGCAA ACGTCGCCAG CCGAAGGCCA AACCTGAGAG CAACGGCGCG
AAGTAA
|
|---|
| Protein sequence | MTVTNFSELE LDERLINALR DKGYERPTAI QAEAIPPAMD GRDVLGSAPT GTGKTAAFLL
PVLQHLLDFP RKKSGPPRVL ILTPTRELAM QVADQARELA AHTSLDIATI TGGVAYMNHA
EVFSENQDVV VATTGRLLQY IKEENFDCRA VETLILDEAD RMLDMGFAQD IETISAETRW
RNQTLLFSAT LEGDAIREFA ERILKEPVEV EADPSRRERK KILQWYYRAD DVVHKTALLV
HLLKQPDVQK SVIFVRKRER VHELAAWLRE AGINTCYLEG EMVQAKRNEA VKRMMDGRVN
VLVATDVAAR GLDILDITHV FNFDMPRTAD TYLHRIGRTG RAGRKGTAIS LVEAHDHLLL
GKVGRYLNEP LKARVIEELR PSTKVPSEKS NGKPSKKVIA KRAADKEKNK EKAKVKVRHR
DAKNVGKRRQ PKAKPESNGA K
|
|---|
| |