Gene Spro_3674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3674 
SymbolrseB 
ID5606494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4066924 
End bp4067883 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content56% 
IMG OID640939225 
Productperiplasmic negative regulator of sigmaE 
Protein accessionYP_001479898 
Protein GI157371909 
COG category[T] Signal transduction mechanisms 
COG ID[COG3026] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.627713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.619241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAA TTTGGTTCTC CGTCTGTCTA TTGACGGGCA GCCTGCTCTA CTCAAACATC 
GCCCCGGCGC AGCCCTCTGC GTCCGGGGCG TTGTTACAAC AGATGAGCAG TGCCAGCCGT
TCGCTCAATT ATGAACTCGC CTATATCAGC ATCAGCAAGC AGGGGATCGA ATCGCTGCGC
TATCGTCATG CGGTGATTGA CCAGCAACCG CTCGGCCAAT TACTGCATAT GGACGGCCCG
CGCCGTGAAG TGCTGCAGCG TGGCGGCGGA ATTAGCTATT TCGAACCCGG CCTGGAGCCC
TTTACGCTGT CCGGCGATCA CATCGTCGAT GCGTTGCCGG CCATTGTTTA TGCTGATTTT
GACCGTCTGG CGAAATATTA CGATTTCATC TCCGTCGGCA GCACCCGAAT TTCCGATCGT
CCATGCGAAG TGATCCGCGT GGTTGCTCGC GATGGTTCAC GCTATAGCTA CATTGTCTGG
ATGGATGAAG CCACCAAGCT GCCGTTGCGG GTGGATTTGA TCGACCGTGA TGGCGAAACG
CTTGAGCAAT ACCGGGTGAT TTCGTTTGTC GTCGGGTCGC AGGTACAAGG CGCGATGCAG
GGGCTGATCA AGGCTAATCT GCCACCCTTG CTGTCGCTTC CGGCGATAGA TAAAATCAAG
TTGAGCTGGA GCACGGGCTG GTTACCGGCT GGGGTCGATG AAGTCGCACG TAACCGTCGC
AAGTTGCCGA ATGTGAACGA ACCTGTTGAG TCGCGGCTCT ACAGCGACGG CTTGTTCAGT
TTCTCGGTCA ACGTCAGCCC GGCGGGCAGC GGTGCCGGCC AGCAATATTA TCGCCAGGGG
CGTCGTACTA TCCAAACCGA AGTGCGTAAC GGCAATGAGA TCACTATCGT GGGCGAACTG
CCGCCGGCAA CGGCCAAGCG TATCGCTGAC AGTATTTCCT TCAAGGTGTC ACCACAATGA
 
Protein sequence
MKQIWFSVCL LTGSLLYSNI APAQPSASGA LLQQMSSASR SLNYELAYIS ISKQGIESLR 
YRHAVIDQQP LGQLLHMDGP RREVLQRGGG ISYFEPGLEP FTLSGDHIVD ALPAIVYADF
DRLAKYYDFI SVGSTRISDR PCEVIRVVAR DGSRYSYIVW MDEATKLPLR VDLIDRDGET
LEQYRVISFV VGSQVQGAMQ GLIKANLPPL LSLPAIDKIK LSWSTGWLPA GVDEVARNRR
KLPNVNEPVE SRLYSDGLFS FSVNVSPAGS GAGQQYYRQG RRTIQTEVRN GNEITIVGEL
PPATAKRIAD SISFKVSPQ