Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3674 |
Symbol | rseB |
ID | 5606494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4066924 |
End bp | 4067883 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640939225 |
Product | periplasmic negative regulator of sigmaE |
Protein accession | YP_001479898 |
Protein GI | 157371909 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3026] Negative regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.627713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.619241 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAA TTTGGTTCTC CGTCTGTCTA TTGACGGGCA GCCTGCTCTA CTCAAACATC GCCCCGGCGC AGCCCTCTGC GTCCGGGGCG TTGTTACAAC AGATGAGCAG TGCCAGCCGT TCGCTCAATT ATGAACTCGC CTATATCAGC ATCAGCAAGC AGGGGATCGA ATCGCTGCGC TATCGTCATG CGGTGATTGA CCAGCAACCG CTCGGCCAAT TACTGCATAT GGACGGCCCG CGCCGTGAAG TGCTGCAGCG TGGCGGCGGA ATTAGCTATT TCGAACCCGG CCTGGAGCCC TTTACGCTGT CCGGCGATCA CATCGTCGAT GCGTTGCCGG CCATTGTTTA TGCTGATTTT GACCGTCTGG CGAAATATTA CGATTTCATC TCCGTCGGCA GCACCCGAAT TTCCGATCGT CCATGCGAAG TGATCCGCGT GGTTGCTCGC GATGGTTCAC GCTATAGCTA CATTGTCTGG ATGGATGAAG CCACCAAGCT GCCGTTGCGG GTGGATTTGA TCGACCGTGA TGGCGAAACG CTTGAGCAAT ACCGGGTGAT TTCGTTTGTC GTCGGGTCGC AGGTACAAGG CGCGATGCAG GGGCTGATCA AGGCTAATCT GCCACCCTTG CTGTCGCTTC CGGCGATAGA TAAAATCAAG TTGAGCTGGA GCACGGGCTG GTTACCGGCT GGGGTCGATG AAGTCGCACG TAACCGTCGC AAGTTGCCGA ATGTGAACGA ACCTGTTGAG TCGCGGCTCT ACAGCGACGG CTTGTTCAGT TTCTCGGTCA ACGTCAGCCC GGCGGGCAGC GGTGCCGGCC AGCAATATTA TCGCCAGGGG CGTCGTACTA TCCAAACCGA AGTGCGTAAC GGCAATGAGA TCACTATCGT GGGCGAACTG CCGCCGGCAA CGGCCAAGCG TATCGCTGAC AGTATTTCCT TCAAGGTGTC ACCACAATGA
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Protein sequence | MKQIWFSVCL LTGSLLYSNI APAQPSASGA LLQQMSSASR SLNYELAYIS ISKQGIESLR YRHAVIDQQP LGQLLHMDGP RREVLQRGGG ISYFEPGLEP FTLSGDHIVD ALPAIVYADF DRLAKYYDFI SVGSTRISDR PCEVIRVVAR DGSRYSYIVW MDEATKLPLR VDLIDRDGET LEQYRVISFV VGSQVQGAMQ GLIKANLPPL LSLPAIDKIK LSWSTGWLPA GVDEVARNRR KLPNVNEPVE SRLYSDGLFS FSVNVSPAGS GAGQQYYRQG RRTIQTEVRN GNEITIVGEL PPATAKRIAD SISFKVSPQ
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