Gene Spro_3673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3673 
Symbol 
ID5606493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4066451 
End bp4066924 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content61% 
IMG OID640939224 
ProductSoxR reducing system protein RseC 
Protein accessionYP_001479897 
Protein GI157371908 
COG category[T] Signal transduction mechanisms 
COG ID[COG3086] Positive regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.290268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.795656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGT GGGCCACGGT CGTTTCGTGG CAACAGGGCG TGGCGCTGCT GCGCTGTGAG 
CCGAAAGCCG GGTGTGGCAG TTGTACTGCC CGTTCTGGCT GTGGCGCGCG GGCGTTGAAT
GAACTGGTGC CGGAAACCGA ACACCAGTTG CAGGTTCATA TCGAGCAGCC GCTTGAGCCG
GGCCAGCGGG TTGAGGTGGG TATTGCGGAA GGCAGCCTGT TGCGCTCAGC AATGCTGGTT
TATCTGACGC CGCTACTGGG CATGATGCTG GGGGGCAGCC TGTTGCAATA CTGGTTGGGT
ACCGATGCTT CTGCCGCGCT TGGTGCACTG CTCGGCGGTG TCGCGGCCTT TATGCTGGCG
CGCAGTCTGG CACACCGCCT CGGTGAACAG GCAAATTACC AACCCATCGT TCTGCAAATT
GGTTTACCGC CTGGGGCCAT GCGCCTGCAA ACGGAAAACC AGCCTCTGCA TTAA
 
Protein sequence
MKEWATVVSW QQGVALLRCE PKAGCGSCTA RSGCGARALN ELVPETEHQL QVHIEQPLEP 
GQRVEVGIAE GSLLRSAMLV YLTPLLGMML GGSLLQYWLG TDASAALGAL LGGVAAFMLA
RSLAHRLGEQ ANYQPIVLQI GLPPGAMRLQ TENQPLH