| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3598 |
|---|
| Symbol | |
|---|
| ID | 5605815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3975647 |
|---|
| End bp | 3978019 |
|---|
| Gene Length | 2373 bp |
|---|
| Protein Length | 790 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640939149 |
|---|
| Product | Alpha-glucosidase |
|---|
| Protein accession | YP_001479822 |
|---|
| Protein GI | 157371833 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000274 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.390231 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATGA AAACCTTAAA AAATTGGACG TTGGCCGGTC AGTATGCCGA TCGCATTGAG
CTGTTGGTCG ATGAACGTCA CCTGTTCTGC CTGTACGTGC TGGAAAACAG CCTGTTCCGC
GTGTTGATTA AACGCAATGG CGAGTTGGCG CTGGATCGCA CCTGGAGCAT TGCGCCGCAG
ACTGATGTGC CCTGGGAAGG GCGTGATCGT TTGAGCGTGG CCGGCTTCGG CCTGCCGGGT
TATCAGTTGC AGCAACATGA GGATCGGCTG GTGGTGACGA CGTCTGCACT GCGCGTTACC
GTGCATCAGC CGCTGTGGCT GGAGTGGGAG CACTGCAACG CCGCCGGTGA ATGGCGTCCG
CTGGCCGCCG ATCGGCCAAC CAGCGCTTAC CTGCTGAACC CGCACGGTGA CGGCGTGGCC
CACTACCAGC GCCGTCAGGC CGCCGAGCGG TACTATGGCC TGGGTGAGAA GGCCGGTGAT
TTGGAGCGTA GCGGTCGCCG CTTTGAAATG CGCAACCTGG ACGCGATGGG TTACAACGCC
GCCAGCACCG ATCCGCTGTA CAAGCACATT CCTTTCACCA TCACCCGTGG GGAAGAGGCC
AGTTTCGGGC TGTTTTACGA CAACCTGAGC AGTTGCTGGC TGGATCTGGG CAATGAGATC
GATAACTACC ATCTGGCCTA TCGCCGCTAT CAGGCCGAAG CGGGGGATCT GGATTATTAC
CTGTTCCTCG GCCCCAAAGT GCTGGACGTG ACCAAGGCGT TTGTACGCCT GACCGGCAAG
ACTCACTTCG GCCCGAAATG GAGCCTGGGC TACAGCGGTT CCACCATGCA TTACACCGAT
GCGCCGGACG CCCAGCAGCA GCTACAGCAG TTTATTCAGC TCTGTCGCCA GCATGATATT
CCCTGCGACT CGTTCCAACT GTCGTCGGGT TATACCTCGA TCGGCAACAA GCGCTATGTA
TTCAACTGGA ACTACGACAA GGTGCCGCAG CCCAAACAGC TGAGCCAGGC ATTTCACGAC
GCCGGGTTAA AGCTGGCGGC CAACATCAAG CCGTGCCTGT TGCATGATCA TCCGCAGTAT
CAGCAGGCGG CGGAGCAGGG GTTGTTTATC CGGGATTCCG AAAGTGACCG GCCGGAGCGC
TCCAGCTTTT GGGACGACGA AGGCTCGCAC CTCGACTTCA CCAATCCGGC GGCGGTGCAA
TGGTGGCAAC AGGGCGTGAC GCAGCAGCTG CTGGAGATGG GCATTGATTC CACCTGGAAT
GACAATAACG AATACGAAGT GTGGGACGGA GAGGCGCGTT GCCACGGTTT TGGCACGCCT
ATCGCCATCA AGCATATCCG CCCGGTGATG CCGTTACTGA TGATGCGCGC TTCAATGGAG
GCTCAGCAAC GCTTTGCTCC CGAGCTGCGG CCTTACCTGA TCTCGCGTTC CGGTTGCGCC
GGTATGCAGC GTTATGTGCA GACCTGGAGC GGCGACAACC GCACCAACTG GCAGACTTTG
CGTTACAACA TCCGTATGGG GTTGGGCATG AGCCTGTCTG GCCTGTATAA CCTGGGGCAC
GACGTCGGCG GTTTCTCCGG TGACAAGCCG GACGCCGAGC TTCTGGTGCG CTGGGTGCAA
AACGGCGTGA TGCATCCGCG TTTTACCATT CACTCCTGGA ACGACGACGC CACGGTGAAT
GAACCCTGGA TGTATCCGGC CGCTACCCCG GCGGTACGCG AGGCGATTAA CCTGCGTTAC
CGGCTGATGC CGTATTTCTA CACCCTGCTG TGGCAGGCCA GTGCCGACGA CGAGCCGATG
CTGCGCCCGA CTTTCCTCGA CCATGAGCAT GACGAGCAGA CCCTGAAAGA AACCGATGAT
TTTATGATTG GTCGCGATCT GCTGGTGGCC AGCGTAGTGG AGCAGGGGCA ACGCCAGCGG
CCGGTGTATC TGCCGGATAA CGGCGATGGT TGGTATTGCT TCTACAGCGG CCAGTGGTTC
AGTGGCGGCC AGACGGTGAT GCTGGAAGCC CCGCTGGAGC GCTTGCCGCT GCTGGTGCGT
GCCGGTGCGG CATTGCCGTT GTCATCCCGC CTGGCGCATG TTGACGTAAC GGCGGACGAT
CGACGTGAGC TTAAGTTGTA CCCGCTAAAA GGCTGTGGCA GCGCTTCTGG GCTGTTATTT
GAAGACGACG GCGAGAGTTA TGGCTGGCAG CAGGGCGACG CGCTGTGGCT GCGCTGGGAG
ATGCTCAGTG ACAATCAGCG CATCACGCTG AACCTCACCA CTGAGGGTCG CTTTAAACCG
GCATGGCGAA CCATCACCTT CAGCTTGCCT GCCGGAGAAG CGCGCGAGTT GTGGATCAAC
GGCGCGCCCG GCAACAGTTT TACGCTGGAA TAA
|
|---|
| Protein sequence | MPMKTLKNWT LAGQYADRIE LLVDERHLFC LYVLENSLFR VLIKRNGELA LDRTWSIAPQ
TDVPWEGRDR LSVAGFGLPG YQLQQHEDRL VVTTSALRVT VHQPLWLEWE HCNAAGEWRP
LAADRPTSAY LLNPHGDGVA HYQRRQAAER YYGLGEKAGD LERSGRRFEM RNLDAMGYNA
ASTDPLYKHI PFTITRGEEA SFGLFYDNLS SCWLDLGNEI DNYHLAYRRY QAEAGDLDYY
LFLGPKVLDV TKAFVRLTGK THFGPKWSLG YSGSTMHYTD APDAQQQLQQ FIQLCRQHDI
PCDSFQLSSG YTSIGNKRYV FNWNYDKVPQ PKQLSQAFHD AGLKLAANIK PCLLHDHPQY
QQAAEQGLFI RDSESDRPER SSFWDDEGSH LDFTNPAAVQ WWQQGVTQQL LEMGIDSTWN
DNNEYEVWDG EARCHGFGTP IAIKHIRPVM PLLMMRASME AQQRFAPELR PYLISRSGCA
GMQRYVQTWS GDNRTNWQTL RYNIRMGLGM SLSGLYNLGH DVGGFSGDKP DAELLVRWVQ
NGVMHPRFTI HSWNDDATVN EPWMYPAATP AVREAINLRY RLMPYFYTLL WQASADDEPM
LRPTFLDHEH DEQTLKETDD FMIGRDLLVA SVVEQGQRQR PVYLPDNGDG WYCFYSGQWF
SGGQTVMLEA PLERLPLLVR AGAALPLSSR LAHVDVTADD RRELKLYPLK GCGSASGLLF
EDDGESYGWQ QGDALWLRWE MLSDNQRITL NLTTEGRFKP AWRTITFSLP AGEARELWIN
GAPGNSFTLE
|
|---|
| |