| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3582 |
|---|
| Symbol | |
|---|
| ID | 5605601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3957402 |
|---|
| End bp | 3958109 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640939133 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001479806 |
|---|
| Protein GI | 157371817 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.243305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA ACTCTACCGT TGAACTGGCC AAGCAAAGGC TTAATGACTG GCTGAGTCAG
GGCGCAATAG CCCCCGGCGA CAAGCTTCCT TCGGAGCGAG AGCTGGGGGA ATTGCTGAAC
ATTAAACGCA TGACGCTGCG TCAGGCGCTG CTGTTCCTGG AAAGTGAGTC GAGGATATTC
CGTAAGGATC GTCGGGGTTG GTTTGCAGCA TTGCCACGCT TTAACTACAA CCCCAATTCG
TCTACCAGCT TCAAACAGGC GGCCATTGAG CAGGGCCGTT CTCCCTCCTG GGGTTATATG
ACCAAGGAGC GGGTTTTGAC GGCACCGGCG GCTATTTGCG ATTTACTGCA GCTTAGTGAA
GGGGCGGAGA TCTACAAAAT CTGTGGCTGG GGAGCGCTGG ATAATCACAT CGTGTTTTAT
CATGAAACCT TTATCAGTCC GCTGGTGGCA CCCGACTTCA TCGAACGCCT GGGTGAGAAC
TCGTTTGCCG ATGTATGGGA AAACGCCTAC GGAACCGCGA CTCGCACCCA TCATTTGGCT
TTTAAGCCGA CCCGATTGTC CGGTGATGCC TGCAAGGTGA TGGGCGGCAA CGCCAGCACG
CCGTCGATTC TGGTAGAGAA GCATCGTGCC GATGCCCAGC GCCGTATCGT GCAGGTGGAT
ATCGAATACT GGCGCTTCGA GTCGGTGGAT TTTTTCATTA ACTTATAG
|
|---|
| Protein sequence | MENNSTVELA KQRLNDWLSQ GAIAPGDKLP SERELGELLN IKRMTLRQAL LFLESESRIF
RKDRRGWFAA LPRFNYNPNS STSFKQAAIE QGRSPSWGYM TKERVLTAPA AICDLLQLSE
GAEIYKICGW GALDNHIVFY HETFISPLVA PDFIERLGEN SFADVWENAY GTATRTHHLA
FKPTRLSGDA CKVMGGNAST PSILVEKHRA DAQRRIVQVD IEYWRFESVD FFINL
|
|---|
| |