Gene Spro_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3563 
Symbol 
ID5605492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3939735 
End bp3940949 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content57% 
IMG OID640939114 
Productmandelate racemase/muconate lactonizing protein 
Protein accessionYP_001479787 
Protein GI157371798 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.851149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTA TCAACGCAGA GGTTTTTGTG ACCTGCCCTG GCAGGAATTT TGTCACGCTG 
AAGATTACCA CTGACGAAGG AATTACCGGC ATCGGCGACG CCACCCTGAA CGGCCGCGAG
CTGCCGGTGG CGTCCTATCT GAAAGATCAC GTCTGCCCGC AGTTGATTGG CCGTGATGCC
CATCAGATCG AAGACATCTG GCAGTTCTTC TATAAAGGCG CTTACTGGCG GCGCGGGCCG
GTCACCATGT CTGCCATCTC CGCCGTAGAC ATGGCGCTAT GGGACATCAA GGGCAAGGCC
GCCAACATGC CGCTGTATCA GTTACTCGGC GGCGCATCGC GCACCGGTGT AATGGTTTAC
TGCCACACCA CCGGCCATTC CATCGACGAA GTGCTCGACG ACTACGCCAA GCATAAAGAG
TTGGGTTTTA AAGCCATTCG CGCCCAGTGC GGCGTGCCGG GCATGAAAAC CACCTACGGC
ATGGCCAAAG GTAAAGGGCT GGCTTACGAG CCTGCCACCA AGGGCAACTG GCCGGAAGAA
CAGCTGTGGT CAACGGAGAA ATACCTCGAT TTCACCCCTA AACTGTTCGA AGCGGTGCGC
AACCGCTTTG GTTTTGATGA GCACTTGCTG CACGACATGC ACCACCGCCT GACGCCCATC
GAGGCGGCGC GCTTCGGTAA AAGCATTGAG CAGTACCGCC TGTTCTGGAT GGAAGACCCA
ACGCCTGCGG AGAATCAGGA ATGTTTCCGC CTGATCCGCC AGCACACCGT CACGCCGATC
GCCGTCGGCG AAGTGTTCAA CAGCATCTGG GACTGCAAAC AGCTGATTGA AGAACAACTG
ATCGACTATA TCCGTACCAC CCTCACCCAT GCCGGCGGCA TTACCGGCAT GCGCCGTATC
GCCGATTTTG CTTCGCTGTA TCAGGTGCGC ACCGGGTCAC ATGGGCCATC CGATCTGTCG
CCAATCTGCA TGGCTGCGGC GCTGCACTTT GATCTGTGGG TGCCGAACTT CGGTGTCCAG
GAATACATGG GTTACTCCGA ACAAATGCTT GAAGTGTTCC CACATAGCTG GAGCTTTAAC
GACGGCTATA TGCACCCTGG CAACAAACCG GGGCTGGGCA TTGAGTTCGA CGAAAAACTG
GCCGCCCGTT ATCCGTACGA ACCGGCTTAT CTGCCGGTCG CGCGCCTGGA GGATGGCACC
CTATGGAACT GGTAA
 
Protein sequence
MKIINAEVFV TCPGRNFVTL KITTDEGITG IGDATLNGRE LPVASYLKDH VCPQLIGRDA 
HQIEDIWQFF YKGAYWRRGP VTMSAISAVD MALWDIKGKA ANMPLYQLLG GASRTGVMVY
CHTTGHSIDE VLDDYAKHKE LGFKAIRAQC GVPGMKTTYG MAKGKGLAYE PATKGNWPEE
QLWSTEKYLD FTPKLFEAVR NRFGFDEHLL HDMHHRLTPI EAARFGKSIE QYRLFWMEDP
TPAENQECFR LIRQHTVTPI AVGEVFNSIW DCKQLIEEQL IDYIRTTLTH AGGITGMRRI
ADFASLYQVR TGSHGPSDLS PICMAAALHF DLWVPNFGVQ EYMGYSEQML EVFPHSWSFN
DGYMHPGNKP GLGIEFDEKL AARYPYEPAY LPVARLEDGT LWNW