Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3563 |
Symbol | |
ID | 5605492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 3939735 |
End bp | 3940949 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640939114 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001479787 |
Protein GI | 157371798 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.851149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATTA TCAACGCAGA GGTTTTTGTG ACCTGCCCTG GCAGGAATTT TGTCACGCTG AAGATTACCA CTGACGAAGG AATTACCGGC ATCGGCGACG CCACCCTGAA CGGCCGCGAG CTGCCGGTGG CGTCCTATCT GAAAGATCAC GTCTGCCCGC AGTTGATTGG CCGTGATGCC CATCAGATCG AAGACATCTG GCAGTTCTTC TATAAAGGCG CTTACTGGCG GCGCGGGCCG GTCACCATGT CTGCCATCTC CGCCGTAGAC ATGGCGCTAT GGGACATCAA GGGCAAGGCC GCCAACATGC CGCTGTATCA GTTACTCGGC GGCGCATCGC GCACCGGTGT AATGGTTTAC TGCCACACCA CCGGCCATTC CATCGACGAA GTGCTCGACG ACTACGCCAA GCATAAAGAG TTGGGTTTTA AAGCCATTCG CGCCCAGTGC GGCGTGCCGG GCATGAAAAC CACCTACGGC ATGGCCAAAG GTAAAGGGCT GGCTTACGAG CCTGCCACCA AGGGCAACTG GCCGGAAGAA CAGCTGTGGT CAACGGAGAA ATACCTCGAT TTCACCCCTA AACTGTTCGA AGCGGTGCGC AACCGCTTTG GTTTTGATGA GCACTTGCTG CACGACATGC ACCACCGCCT GACGCCCATC GAGGCGGCGC GCTTCGGTAA AAGCATTGAG CAGTACCGCC TGTTCTGGAT GGAAGACCCA ACGCCTGCGG AGAATCAGGA ATGTTTCCGC CTGATCCGCC AGCACACCGT CACGCCGATC GCCGTCGGCG AAGTGTTCAA CAGCATCTGG GACTGCAAAC AGCTGATTGA AGAACAACTG ATCGACTATA TCCGTACCAC CCTCACCCAT GCCGGCGGCA TTACCGGCAT GCGCCGTATC GCCGATTTTG CTTCGCTGTA TCAGGTGCGC ACCGGGTCAC ATGGGCCATC CGATCTGTCG CCAATCTGCA TGGCTGCGGC GCTGCACTTT GATCTGTGGG TGCCGAACTT CGGTGTCCAG GAATACATGG GTTACTCCGA ACAAATGCTT GAAGTGTTCC CACATAGCTG GAGCTTTAAC GACGGCTATA TGCACCCTGG CAACAAACCG GGGCTGGGCA TTGAGTTCGA CGAAAAACTG GCCGCCCGTT ATCCGTACGA ACCGGCTTAT CTGCCGGTCG CGCGCCTGGA GGATGGCACC CTATGGAACT GGTAA
|
Protein sequence | MKIINAEVFV TCPGRNFVTL KITTDEGITG IGDATLNGRE LPVASYLKDH VCPQLIGRDA HQIEDIWQFF YKGAYWRRGP VTMSAISAVD MALWDIKGKA ANMPLYQLLG GASRTGVMVY CHTTGHSIDE VLDDYAKHKE LGFKAIRAQC GVPGMKTTYG MAKGKGLAYE PATKGNWPEE QLWSTEKYLD FTPKLFEAVR NRFGFDEHLL HDMHHRLTPI EAARFGKSIE QYRLFWMEDP TPAENQECFR LIRQHTVTPI AVGEVFNSIW DCKQLIEEQL IDYIRTTLTH AGGITGMRRI ADFASLYQVR TGSHGPSDLS PICMAAALHF DLWVPNFGVQ EYMGYSEQML EVFPHSWSFN DGYMHPGNKP GLGIEFDEKL AARYPYEPAY LPVARLEDGT LWNW
|
| |