| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3558 |
|---|
| Symbol | |
|---|
| ID | 5605472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3935275 |
|---|
| End bp | 3935661 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640939109 |
|---|
| Product | PilT domain-containing protein |
|---|
| Protein accession | YP_001479782 |
|---|
| Protein GI | 157371793 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATATGT TTGATACCAA TACGGTCAGC CAGCTCTTTC GTCGGCACCC TCGTCTGCTC
GGCTTAATGG AAAAGATCCC GCCTTCTGCG GTCTGCATTT CCAGTATTAC CGAGGCTGAA
TTGCTCTATG GCGTCGCCAA ACGGCAGAGT CTGACGCTGA AAGCGACGGT TGCGGCATTC
CTTGATTCCG TGACGGTCTA TGCCTGGGAC AGTGAAGCCG CGCATTGCTA TGGCGCTATG
CGGGCGGAGA TGACAAAAAA CGGGCGGGTG ATGGGGGCTT TGGATCAGCT TATTGCCGCA
CACGCCCAGA GCCGCGGTGC GACGATTGTG ACTAACGATA AGGCGTTCGC CATGGTGCCA
GGGCTGGCAG TGGAAGACTG GACTTAA
|
|---|
| Protein sequence | MYMFDTNTVS QLFRRHPRLL GLMEKIPPSA VCISSITEAE LLYGVAKRQS LTLKATVAAF
LDSVTVYAWD SEAAHCYGAM RAEMTKNGRV MGALDQLIAA HAQSRGATIV TNDKAFAMVP
GLAVEDWT
|
|---|
| |