Gene Spro_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3519 
Symbol 
ID5605202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3893863 
End bp3894474 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content55% 
IMG OID640939072 
ProductDNA replication initiation factor 
Protein accessionYP_001479745 
Protein GI157371756 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR03420] DnaA regulatory inactivator Hda 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000222662 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.661006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCGA TCCAGTCTGC CGTTCGTCAG GAACATGGCA GCTATATCTA TTTTTGGTCA 
CGCGAGGGTG GTGGGCGCAG CCACCTGTTG CATGCGTCCT GCGCGGAGCT TTCGCTGCGT
GGCGAGGCCG TAGGCTATGT GCCACTGGAT AAGCGAGCCT ATTTCGTGCC TGAAGTATTG
GATGGCATGG AGCAGCTGGC CCTGGTGTGT ATCGATAATA TCGAATGCAT TGCCGGTGAC
GAAGAGTGGG AAATGGCCAT CTTCAATCTC TACAACCGCA TTCTGGAAAC CGGCCGTACG
CGCCTGTTTA TTACCGGCGA TCGCCCGCCA CGCCAATTGA ATCTCCATTT GCCCGATCTG
GCTTCACGCC TGGACTGGGG GCAAATCTAC AAGTTACAGC CGCTTTCGGA TGAAGAGAAA
TTGCTGGCGT TGCAACTACG CGGCAAGCTG CGCGGTTTTG AATTACCGGA GGACGTGGGG
CGTTTCCTGC TCAAACGCCT GGATCGCGAA ATGCGCACGT TGTTTATGAC GCTGGATCAA
CTCGATCACG CTTCAATCAC CGCCCAGCGC AAGCTGACCA TCCCGTTTGT GAAAGAGATC
CTGGGGCTAT AA
 
Protein sequence
MSAIQSAVRQ EHGSYIYFWS REGGGRSHLL HASCAELSLR GEAVGYVPLD KRAYFVPEVL 
DGMEQLALVC IDNIECIAGD EEWEMAIFNL YNRILETGRT RLFITGDRPP RQLNLHLPDL
ASRLDWGQIY KLQPLSDEEK LLALQLRGKL RGFELPEDVG RFLLKRLDRE MRTLFMTLDQ
LDHASITAQR KLTIPFVKEI LGL